Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1457 ATGATGTTAGACGGAACTGAAGACGAAGACAAGTTCCTGGCCGCCGGAATCGCTGGTCTTCAACAGAATGCCTTCTACATGCATCGCGCTTTGGACTCAAATAATCTCAGGGATGCTTTGAAGTATTCAGCTCAGATGCTTTCTGAGCTTCGGACTTCTAAGCTTTCCCCTCACAAGTACTATGAGCTCTACATGCGGGCCTTTGATCAGTTAAGGAGGCTGGAGATCTTCTTCGAGGAAGAGACTCGACGGGGTTGCTCTATAATTGATCTTTATGAACTTGTCCAGCATGCTGGCAACATTTTGCCTCGATTGTATCTACTCTGTACAGTAGGATCTGTATACATAAAATCCAAGGAAGCTCCTGCTAAGGATGTTCTCAAGGATCTTGTGGAGATGTGCCGTGGTATTCAGAACCCTGTTCGTGGACTCTTTCTCAGGAGTTACCTTTCTCAAGTTAGTAGGGATAAGTTGCCTGATATTGGTTCTGAGTATGAAGGTGATGCAGACACTGTAACAGATGCTGTAGAGTTTGTACTCCAAAATTTCACTGAGATGAACAAACTTTGGGTGCGGATGCAACATCAGGGGCCTGCCCGTGAGAAGGAAAAGCGGGAGAAAGAAAGGAGTGAGCTGCGTGATCTTGTGGGAAAGAATCTTCATGTACTCAGTCAGGTAGAGGGTGTTGATCTTGACATGTACAAAGATGTTGTATTACCCAGAGTACTGGAGCAGGTTGTAAACTGCAAAGATGAGCTAGCCCAATTCTACTTGATGGATTGCATAATACAAGTCTTCCCTGATGAGTACCACTTGCAAACTCTTGATGTATTGTTGGGTGCTTGTCCTCAGCTTCAGCCATCCGTTGATATCAAGACAGTGCTTTCCCAGTTAATGGAAAGGCTTTCAAATTACGCTGCTTCAAGTGCAGAGGTGTTACCTGAGTTTTTGCAAGTGGAAGCATTTTCCAAGTTCAGCAATGCCATTGGCAAGGTGATAGAAGCTCAGGCTGAGATGCCCACTGTTGGAGTTGTAACTTTATATTCTTCTCTTCTGACCTTCACTCTTCATGTGCACCCTGATCGACTTGATTATGCAGATCAAGTTCTGGGAGCATGTGTGAAAAAACTCTCTGGCAAAGGGAAGATTGAGGACACCAGGGCAACGAAGCAGATTGTTGCCCTTTTAAGTGCTCCATTAGAGAAATATAATGATATTGTGACTGCCTTGAAGCTTTCAAACTATCCTCGTGTCATGGAATACCTTGATATTCCTACAAATAAGGTCATGGCTGCTGTTATTATTCAAAGCATGATGAAAAACCGAACCCGCATTTCTAGTTCGGACAAGgTTGAAGCATTGTTTGAACTGATAAAGGGGCTCATTAAAGATTCTGATGAAACTCCTACTGAAGAGCTGGATGAAGATGATTTCCAAGAGGAGCAGAATTCTGTTGCACGTTTAATCCAGATGCTTCATAATGATGATCCAGAAGAGATGTTTAAGATTATAGATACTGTGAGGAAGCACATACTGACTGGGGGACCAAAACGTCTGCCTTTCACTGTTCCAGCTCTTGTTTTCTCGTCTCTAAAGTTGGTCAGACTATTGCAAGGACAAGAGGAAAATCCTTTTGGAGATGATGCATCAACTacacccaagaaaatttttcagcTTTTGAATCAGACTATAGAGACTCTGTCAGGCGTCCCTGCACCAGACCTGGCATTACGCTTGTACTTGCTATGTGCTGAGGCCGCAAATGATTGTGATTTAGAACCTGTTGCGTATGAATTTTTCACCCAAGCTTATATTCTGTATGAAGAAGAAATTTCTGATTCCAGAGCACAGGTTACTGCTATCCATTTAATAATAGGAACACTTCAAAGGATGCATGTCTTTGGTGTTGAGAACAGGGATACTCTAACTCACAAGGCCACAGGGTATTCAGCAAAGCTCTTGAAGAAGCCAGATCAATGCAGAGCTGTGTATGCATGCTCACATCTGTTTTGGGTTGATGATCATGATGACATGAAGGATGGAGAGAGAGTCCTATTGTGCCTCAAGCGGGCTTTAAGAATTGCAAATGCTGCCCAACAAATGTCAAATGCAGCACGGGGTAACACTGGATCAGTTATTCTTTTCATTGAGATATTGAACAAGTATCTATACTTCTTTGAGAAGGGAAACCCGCAAGTCAACGTTGCTGCTATCCAGGGCCTAATCGAGTTAATCATGACCGAAATGCAAAGTGACACCGCAACCCCAGATCCAGCTGCAGATGCTTTCCTTGCAAGCACAATGAGATATATACAGTTCCAGAAACAAAAAGGCGGTTCAGTCGGAGAGAAGGATGGCTACAAGAATCCTTATCTAAAGAAAACTGGAGCCACTACCTTAGTTCTATTttgcattttctaa 2421 0.4267 MMLDGTEDEDKFLAAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELYMRAFDQLRRLEIFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQNPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVTDAVEFVLQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQVEGVDLDMYKDVVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGACPQLQPSVDIKTVLSQLMERLSNYAASSAEVLPEFLQVEAFSKFSNAIGKVIEAQAEMPTVGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKKLSGKGKIEDTRATKQIVALLSAPLEKYNDIVTALKLSNYPRVMEYLDIPTNKVMAAVIIQSMMKNRTRISSSDKVEALFELIKGLIKDSDETPTEELDEDDFQEEQNSVARLIQMLHNDDPEEMFKIIDTVRKHILTGGPKRLPFTVPALVFSSLKLVRLLQGQEENPFGDDASTTPKKIFQLLNQTIETLSGVPAPDLALRLYLLCAEAANDCDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDHDDMKDGERVLLCLKRALRIANAAQQMSNAARGNTGSVILFIEILNKYLYFFEKGNPQVNVAAIQGLIELIMTEMQSDTATPDPAADAFLASTMRYIQFQKQKGGSVGEKDGYKNPYLKKTGATTLVLFCIF 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1457 806 SUPERFAMILY ARM repeat 208 515 IPR016024 -
Sto11g1457 806 SUPERFAMILY ARM repeat 463 746 IPR016024 -
Sto11g1457 806 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 2 784 - -
Sto11g1457 806 PANTHER VACUOLAR SORTING PROTEIN 35 2 784 IPR005378 GO:0015031|GO:0030906|GO:0042147
Sto11g1457 806 Gene3D - 465 775 IPR042491 -
Sto11g1457 806 PIRSF Retromer_Vps35 2 797 IPR005378 GO:0015031|GO:0030906|GO:0042147
Sto11g1457 806 Pfam Vacuolar protein sorting-associated protein 35 13 747 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1457 Sto-Chr11 13835986 13847517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1457 K18468 - gmx:100809289 1420.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1457 11 13835986 13847517 Sto11g1457 11 13835986 13847517 ECH