Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1423 ATGTCCGATTCAAATCGGAGGCTCGCGAAGCCcacttcttcgtcttcttcatGGAATTTTCCGGTGTTCTTTGCCGTCCTACTCCCTATCGCCCTGGCTGCCGTCGTCTTCCGTCTCGAGCCGTTCGAGCCGGCGGAGTATCCGGCGGAGGAGCTAACCGGACGCGTGGTTAGGGTTCCGGCGACCAATGGGAATATCGGAAGAGTGTGGGAGAGTGTGGGAAAGGGAGATCTGGTGGGACCTGAGGATTTAGTATACGATAGAGAGGAAGGTGTGATTTATACCGGTTGTTGGGATGGGTGGATCAAGCGAGTCACAGTGAACGACTCGGTGGTGGAAAGTCTGGTCAACACCGGCGGGAGACCTCTCGGTCTTGCTTTGCCCAACAATGGTGAACTTATCGTTGCTGATTCGTACAAGGGGCTGTTACGTATAACAAAGGAAGGGGCAGTTGAAGTGTTGACAGATGAAGTTGATGGGTTAAAGTTCAAACTAACAGATGGTGTGGATGTAGCAAAAGATGGCACCATTTATTTCACAGACGCTTCATACAAATACAGTTTCAAAGAATTCATTTATGACATATTGGAAGGAAAACCTCACGGAAGATTCATAAGCTATGATCCATCAACAAAACAAACTACACTTCTCGCATCTAACCTCTATTTTGCCAATGGTGTTGCAGTCTCTCCAGATCAACAATTTGTGCTCTTTTGCGAGACTCTTCTGAGGAGGTGCAAAAAATATTACATAGAGGGCCCAAAGAAAGGAAGCATAGAAACCTTTATTGCTGATCTTCCTGGTTTTCCTGATAACATCCATTACGACGGAGAAGGGCAGTATTGGATTGGACTCTCCTCGTCTCCAACATTTTCTTGGGATTTAGCAATGAAATACCCTTTCATTCGGAAGGCACTAGCAATCATAACGAGTAAATCCGAAGCAAGAACCAAAGGCATCTGGATCTTCCAGCCATCTTCGTCCTCCTCCAGCTCCGACGAGTGGTGGTGGGAGCACAATCCCGTGAGCGCCGGCTCTAGGTGGAGCCCTTCGCCGGAGACCCAAATGTGGGGTTTCCCTACTCCACAAAATAGTTGTGGGAATAATATCTTAGATTCACTCTTCGGGGAAGCCTTGAATTTCAAAGTTAAAATGGTGGTGTTGGAAAAGGAGGTTCTCTGCAATTGGGTTCCATGA 1197 0.4687 MSDSNRRLAKPTSSSSSWNFPVFFAVLLPIALAAVVFRLEPFEPAEYPAEELTGRVVRVPATNGNIGRVWESVGKGDLVGPEDLVYDREEGVIYTGCWDGWIKRVTVNDSVVESLVNTGGRPLGLALPNNGELIVADSYKGLLRITKEGAVEVLTDEVDGLKFKLTDGVDVAKDGTIYFTDASYKYSFKEFIYDILEGKPHGRFISYDPSTKQTTLLASNLYFANGVAVSPDQQFVLFCETLLRRCKKYYIEGPKKGSIETFIADLPGFPDNIHYDGEGQYWIGLSSSPTFSWDLAMKYPFIRKALAIITSKSEARTKGIWIFQPSSSSSSSDEWWWEHNPVSAGSRWSPSPETQMWGFPTPQNSCGNNILDSLFGEALNFKVKMVVLEKEVLCNWVP 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1423 398 Pfam Strictosidine synthase-like, N-terminal 73 105 - -
Sto11g1423 398 SUPERFAMILY Calcium-dependent phosphotriesterase 71 287 - -
Sto11g1423 398 PANTHER STRICTOSIDINE SYNTHASE-RELATED 15 310 - -
Sto11g1423 398 Pfam Strictosidine synthase 167 253 IPR018119 GO:0009058|GO:0016844
Sto11g1423 398 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 5-LIKE 15 310 - -
Sto11g1423 398 Gene3D - 66 329 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1423 Sto-Chr11 13586304 13593447 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1423 - - fve:101304032 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1423 11 13586304 13593447 Sto11g1423 11 13586304 13593447 ECH