Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1343 ATGGCCTTTACATTTTACTCTCTGTTTTCCCCATTCATCATCCTTCATCTCCTCATTCTCTGCCCTTCAAGAGCCACCACTAATTTAGGCTTCTCAGCCAATCTCATCCCTCGTGATTCCCCTTTGTCTCCTTTCTATAATCCATCGAAGTCACATTTCGACCTCTTGCATGATGCTTTCAAACGCTCACTAAACCGTATCCACCATTTCAAATCCGCTTTACTTTCTTCCTCAGAAAGCAAAATCCAAACCAGAATAATTCCTGGTGGAGGAGAATTCCTCATGAACATATCAATAGGAACACCACCTGTTGAATTCATAGGCATAGCAGATACAGGAAGTGACCTCACATGGACACAATGCTTGCCATGTGAAGAATGTTTCCACCAAACTATTCCTCTCTTCAATCCCAAACATTCCTCAACATATAGTACGATCCCATGCCAAACAAGTACTTGCAATGAATTAGAGAGAGCTGCTTTTTGTAGTGGAAGTGGCCAAAATAGTACATGTGGGTATGGTTACTCCTATGGAGATGGCTCTCACACTAATGGGATCCTTTCCTACGAAACACTAACCATTGGCGGAAAGTCACTCCGGAAGATCGCATTCGGGTGTGGACATGACAGTGAAGGGACATTTGATGAGAATGAGTCTGGAATTATAGGCCTAGGAGGTGGGAAACTTTCCTTAATTTCTCAGATTGGTGTGTCTGTAGGCAAGAAATTCTCCTATTGTTTAGTACCAACAACCTCAAATAATGCTTCTGGGATAATTAGTTTTGGGACGGACGCTAATGTTCCTGCTTCATCTGGTGCTATAACAACTCCTTTGGTACCAAAATCCCCTGATACATACTATTACCTAACATTGGAAGGTATCAGTGTAGGAAGCAATAGAATTAATGCCATTTCCAAAAAGGGTACATCAAGATCAAATTTTGATGTTGGTAATGAAGAgggtaatattattattgattcAGGGACAACTTTGACATTTCTGCCATCTGAGATATTTGATGATGTGGTGTCTAAAGTGGGGAAAGCAGTGAGGGGTGAGAAGGTGGAAGATCCTACTGGTATGCTTAGTCTTTGTTATAAATATAGTGAGGACCTTGAATTCCCTATTCTCACAGTACATTTCAATGGGGGTGATGTGAAGTTGAATCCATTCAATTATTTTGCTAAGGTTAATGATGATGTGGTGTGTTTTACTATGGTTTCATCCAAAGCTGATATTCCTATATATGGGAACTTGGCTCAGATGGATTTTTTGGTGGGGTATGACCTTGAGGCTAAAACGGTGACGTTTGTGCCAACTGATTGCACCAAACGTGCAAATATGTGTGCTGTTCTTGAAAACTTTCGCATTCGATCTTTTATGTCGGCCCCGGAGATCCATGGCATTAGAATTGAGAACATTCCAGGATGTAATGATGGTGTTTGTATCACAGCACCATACCCAGAGTTTTCAAACTCTGCTACAACAGGAGTACTCAATGCACCACATGCTACTATTGTGACCTTTGATTCCACCAAACATACGTCTTTAACTCCTTTGTATGATTCATACTCAAAAGCCACTCCATGTGCTATTTTCCTAgctcttcctttcttcttcttgtgtAAGACTTGTATTGCCTCACAATTAGGAAGGATTACTCCATTACCAGATTTAACTAAGTCCACAAGCCATGTCTCTGATGTGCCCTTCTTCTTCCCATCTTTACAACCCATACAGCACCACCCACAATAG 1755 0.4023 MAFTFYSLFSPFIILHLLILCPSRATTNLGFSANLIPRDSPLSPFYNPSKSHFDLLHDAFKRSLNRIHHFKSALLSSSESKIQTRIIPGGGEFLMNISIGTPPVEFIGIADTGSDLTWTQCLPCEECFHQTIPLFNPKHSSTYSTIPCQTSTCNELERAAFCSGSGQNSTCGYGYSYGDGSHTNGILSYETLTIGGKSLRKIAFGCGHDSEGTFDENESGIIGLGGGKLSLISQIGVSVGKKFSYCLVPTTSNNASGIISFGTDANVPASSGAITTPLVPKSPDTYYYLTLEGISVGSNRINAISKKGTSRSNFDVGNEEGNIIIDSGTTLTFLPSEIFDDVVSKVGKAVRGEKVEDPTGMLSLCYKYSEDLEFPILTVHFNGGDVKLNPFNYFAKVNDDVVCFTMVSSKADIPIYGNLAQMDFLVGYDLEAKTVTFVPTDCTKRANMCAVLENFRIRSFMSAPEIHGIRIENIPGCNDGVCITAPYPEFSNSATTGVLNAPHATIVTFDSTKHTSLTPLYDSYSKATPCAIFLALPFFFLCKTCIASQLGRITPLPDLTKSTSHVSDVPFFFPSLQPIQHHPQ 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1343 584 Pfam Xylanase inhibitor C-terminal 287 438 IPR032799 -
Sto11g1343 584 CDD pepsin_A_like_plant 92 442 IPR034161 -
Sto11g1343 584 ProSiteProfiles Peptidase family A1 domain profile. 93 438 IPR033121 -
Sto11g1343 584 SUPERFAMILY Acid proteases 87 445 IPR021109 -
Sto11g1343 584 Pfam Xylanase inhibitor N-terminal 93 262 IPR032861 -
Sto11g1343 584 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 14 443 - -
Sto11g1343 584 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 323 334 IPR001969 GO:0004190|GO:0006508
Sto11g1343 584 PANTHER OS07G0603500 PROTEIN-RELATED 14 443 - -
Sto11g1343 584 Gene3D Acid Proteases 262 451 IPR021109 -
Sto11g1343 584 Gene3D Acid Proteases 72 261 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1343 Sto-Chr11 12989157 12992495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1343 76 444 Miscellaneous Gene Families AT1G77480 25.791 3.30e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1343 - - qsu:112006534 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1343 11 12989157 12992495 Sto11g1343 11 12989157 12992495 ECH