Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1342 ATGGCTGCCTTCACTCGAACGTGGTGTCCGCTCTCTGTGGATTCACCACTTTGTCGCTACCatttccgaaaccctaaaccttcattCCTTCTCATCCCCTGCTCCAGCAAAACCCTCGTGCGATTCAGTAGTACAATTAGATTCTCCGGTAACCGGAATGTGGTACCTCGTTCGCCGGCGGCCACCGCTGGCGTCGAACATCAGGCATATTCAGGAAAGCCTCTCGTCTTAGCTCAGAATTTTGTGCGCCTCGCCGTTTCTGTGGTGCTGTTTCTTGGCTTCGGTTTTTGCTTTCGCGTTCGTGTATGTTCGGCTTCTTCTTTCACTCTCACCGCCACTTCTTCATCGCTTCAGGAGAAGCAGACTACTCAAGATGATGAGGACGTAAGAAAACAAGATAACGACGAAGAAGATGTTCTTGATAAGGATTTAGAAGCAGCTTTTAATGCTTGGAAATCTAAAACATTCGCATTGACTGTGCCTCTCAGAATTGTTGCTCTACGTAGCTCTGTGCCTCCTTCATGGATAAAGgaCTTCATGAGATCTCAAGGGAGGAGATTAAAGTTTAATGTGAAGTATAATGTGAGTCTTGAGAGTATCTTCTCTGATCTGTCAATTCCCTTTACTAAAGGTAATCTTGGGCCTGCATCTGCTTTGGCAGCAGATGTTGTCACTATTGGTGACTCCTGGCTTAAATTTGCCATTGACAAAGGTATAATTGAGCCAATACGAGATGTAGAAGACCAGGATTGGTTTAAGGGCCTAGATGAGAAATGGAagGTATACCTACGCAGGAACACCGATGGAGAAATAGATCCTAAAGGGGATATATGGGCAGCTCCATATCGATGGGGTTGTTTGGTAATAGCGTACAACAAAAGTAAATTTCAAAAGCATAATTTGGCTCCTATAGAGGATTGGGCAGATTTGTGGCGGCCAGAGCTTGCAGGGAGAATCTCGATGGTTGATTCCCCCAGAGAGGTAGTTGGTACAGTTTTGAAGTATATGGGAGCCTCATACAATACAAACAACATAAACTTGCAAGTTGATGGTGGGAGGGATGCCGTTCAACATAATTTAGCTCTACTTGGAAAACAGGTTCGACTATTTGACAGTGTTCACTATTTGAAAGCTTTTGGAGTTGGAGTTGGAGACGTGTGGGTAGCTGTTGGATGGAGTAGTGATGTTATTCCCTTTGCCAAGCGCATGTCTAATGAGGTAATCCCTGAAAAGGGGGAAAGCCTTGATGTGAAAATAGATTGCTTACCATGTaaaaaggatttatcaaaagaaaaaagaatcatTGAGGTTAGAAGCaaGTATGCGGTgaaTCATCTATCTATACTTTTTGTAGTAAGCCTACATAGAATAATCGAGGTCAACCAACGAGCGATTagGAGAAAATCTgtgtttgctataaagagtgttttaaaaattactaatcACCAAATCAGGAGTGGCGCGCGCATATCCCACCGTTTCATAGTACATGCCAAACCACTCTGcattttggctaaagtactatttggtcctcaatTGAAGATTCAAAGTTTGAGTGttcaatggtattgtatcactgaacttcagtacatccctccaatcatgtatattaccgtaccactgaacatctactccggCTTGCGGATCAAGTCACAAATGACATCTCACAAAGCTTAA 1677 0.3876 MAAFTRTWCPLSVDSPLCRYHFRNPKPSFLLIPCSSKTLVRFSSTIRFSGNRNVVPRSPAATAGVEHQAYSGKPLVLAQNFVRLAVSVVLFLGFGFCFRVRVCSASSFTLTATSSSLQEKQTTQDDEDVRKQDNDEEDVLDKDLEAAFNAWKSKTFALTVPLRIVALRSSVPPSWIKDFMRSQGRRLKFNVKYNVSLESIFSDLSIPFTKGNLGPASALAADVVTIGDSWLKFAIDKGIIEPIRDVEDQDWFKGLDEKWKVYLRRNTDGEIDPKGDIWAAPYRWGCLVIAYNKSKFQKHNLAPIEDWADLWRPELAGRISMVDSPREVVGTVLKYMGASYNTNNINLQVDGGRDAVQHNLALLGKQVRLFDSVHYLKAFGVGVGDVWVAVGWSSDVIPFAKRMSNEVIPEKGESLDVKIDCLPCKKDLSKEKRIIEVRSKYAVNHLSILFVVSLHRIIEVNQRAIRRKSVFAIKSVLKITNHQIRSGARISHRFIVHAKPLCILAKVLFGPQLKIQSLSVQWYCITELQYIPPIMYITVPLNIYSGLRIKSQMTSHKA 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1342 558 Gene3D - 285 435 - -
Sto11g1342 558 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 80 490 - -
Sto11g1342 558 SUPERFAMILY Periplasmic binding protein-like II 162 402 - -
Sto11g1342 558 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 80 490 - -
Sto11g1342 558 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 276 292 IPR001188 GO:0015846|GO:0019808|GO:0042597
Sto11g1342 558 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 305 319 IPR001188 GO:0015846|GO:0019808|GO:0042597
Sto11g1342 558 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 323 342 IPR001188 GO:0015846|GO:0019808|GO:0042597
Sto11g1342 558 MobiDBLite consensus disorder prediction 116 135 - -
Sto11g1342 558 Pfam Bacterial extracellular solute-binding protein 221 413 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1342 - - aprc:113857970 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1342 11 12971487 12985242 Sto11g1342 11 12971487 12985242 ECH