Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1288 ATGGCTTCTTCAAAACCTCAGTCCTTGCGGGGCTCATCAACTGTTCGAAGAATTACCCAAATGAACAATGATGCTGATGGAGAGAGTGAGAATGGGGGTAGTGTTGGCCTAGCTACTTACACAGTTCACATACCTCCAACTCCTGATAACCAGCCCATGGAAATCTCTATGGAAAGATCCACTTCTCGGAGAGTGGAAGACCAATATGCATCAAGTTCTATGTTCACTGGTGGTTTCAATcaggtcacacgagcccactTGAAGGAGAAAGTGATTGAATCCGATTCAAGCCATCCCCAGATGGCTGGTGCTGCAAAAGGGTCACCTTGTGCTGTGCCTGGCTGTGATGGAAGGGTCATGCCTGATGAGAGAGGATTGGATATTGTGCCTTGTGAGTGTGACTACAAGATTTGTAGGGATTGTTATAGAGATGCTTTGAGAACTGGTGATGGGATTTGCCCAGGATGTAAAGAGCCTTACAAGGAGCTGCCAGATTCTTCATCTGATGCTGCTTTACCATTGCCATCTTCTTCTCCTACGATGTCAAAGATGGAGAGGAAGTTGTCATCGATGAAATCGAAATCAGGGGCATTGGTAAGCAGCCAAACCAATGATTTTGATCATAATCAGTGGTTGTATGAAACTAAGGGGAGCTATGGATATGGGAATGCTATGTGGCCAAAAGATTCAGAAAATGATTCTGGTTCTGAGTGGATGGCTGGCGATCCTAAAGTTTTCAAAGAGAAGCAGTGGAAGCCACTGACTCGGAAGTTGAATATCTCTGCTGCAATTCTGAGTCCATATAGGCTCCTAATTTTTGTTCGTATGGTGGttcttgcattttttttaaagtggaGGGTAGAAAACCCAAATGATGATGCAATCTGGTTATGGGCCATGTCTGTGGTTTGTGAAATATGGTTTGCCTTTTCTTGGCTGCTTGATCTACTTCCCAAGCTTTGCCCCATAAATCGTTTTGTTGATCTTGATGTTCTAAAAGAGAAGTTCGAAACTCCTAATCCTAGCAATCCTACCGGCAAGTCCGATCTTCCAGGAATAGATATTTTTGTGTCAACAGCAGACCCTGAAAAAGAACCACCACTTGTTACTGCGAACACTATTCTCTCTATTTTGGCTGCTGACTATCCTGTTGAAAAGCTTTCATGTTATGTCTCTGATGATGGCGGTGCACTTCTGACCTTTGAGGCCATGGCTGAGGCTGCCAGTTTTGCCAACTTGTGGGTTCCTTTTTGTCGAAAGCACGACATTGAGCCGAGGAACCCAGAATCTTATTTTAATATGAAGAGAGATCCTTATAAGAACAAGGTGCGCTCTGACTTTGTTAGAGACCGCAGGCGGGTTAAGCGGGAGTATGACGAGTTCAAAGTTCGGGTTAATAGTCTCTCTGATTCAATCCGGCGACGTTCTGATGCTTATAATGCTAGAGAAGAGATCAAAGCCATGAAACTTTGgagagagaatggaaatgatGAACCCATGGGGAATTTGAAAATTCCTAAAGCAACTTGGATGGCTGATGGTACTCATTGGCCAGGCACTTGGACAGCTTCCACACTAGAGCACTCTAGGGGAGACCATGCCAGTATCATACAGGTAATGTTAAAACCCCCGAGTGATGAACCACTTACAGGCACAACATCGGAGTCAAATGCCATCGATTTCACAGAAGTTGATATTCGTCTTCCCATGCTAGTTTATGTTTCTCGTGAAAAAAGACCTGGCTATGATCACAACAAGAAGGCTGGGGCTATGAATGCCCTGGTTCGAGCTTCAGCAATTTTGTCTAATGGCCCTTTCATCCTTAACCTTGATTGTGACCATTACATCTATAATTCCCTGGCACTGAGAGAAGGTATGTGCTTCATGATGGACCGTGGTGGGGAGGAGATCTgttatgttcagtttcctcagaGGTTTGAAGGAATTGATCCTTCTGATCGCTATGCCAATCATAATACTGTCTTCTTTGATGTTAACATGAGAGCACTCGATGGGCTTCAAGGTCCTGTATATGTCGGCACAGGATGCTTGTTTCGAAGGACTGCACTTTATGGCTTTGATCCACCCCGAACGAAAGAAGAGGTTGGATGGTTTGGTCGTAAGAAATCCTCATCAGTTGCCTCTGTGCCTGAAGTTAGTTCTATTGAGGATCAGTCACTATACAATGATGACGAAGAAATGAGCATTGCTCTCATTCCTAAGAGATTTGGCAACTCAAACCTACTTGTTGACTCAATTAGGGTGGCAGAGTTCCAAGGGCGGCCCCTTGCTGATAACCCGGCCATAAAGAATGGACGTCCACCCGGTGCTTTAACCCTTCCTCGAGATCTTCTTGATGCATCTACTGTTGCAGAGGCTATCAATGTCATTTCATGTTGGTATGAGGATAAGACTGAATGGGGCCATAGAATTGGGTGGATTTATGGATCTGTAACTGAGGATGTTGTGACTGGTTATAGAATGCACAATAGGGGATGGCGATCTGTTTATTGTGTGACTAAGAGGGATGCCTTCCGTGGGACTGCTCCAATAAATCTGACCGATCGGCTACACCAAGTCCTCCGATGGGCGACTGGCTCAGTTGAAATATTCTTTTCTCGTAATAATGCTATCCTGAGTAGCTCTAGGATGAATTTTCTGCAGAGGATTGCTTACCTCAATGTTGGAATCTATTCCCTTGATGTAAACTTCCTAGTTTACCTCTTAGGCATCACCGTGACCCTTGTTTTTCTTGCTGCTCTTGAGGTCAAGTGGTCTGGTATTGATTTAGAAGAGTGGTGGAGGAATGAACAGTTCTGGTTGATTGGAGGCACAAGTGCTCATCTCGCGGCGGTGCTTCAAGGTCTCCTTAAAGTGTTAGCTGGAATCGAGATATCATTCACGTTGACTTCAAAGTCTGCCGGTGACGATGAAGATGACGAGTATGCGGATTTATATATAATCAAGTGGTCATCTCTTATGATACCGCCTGTGACAATCATGATGATGAACTTGATAGGAATTTCTGTTGCAGTGATTAGAACTATATATAGTGATAATCCTGATTGGAGCAGTCTGCTTGGAGGTGTGTTTTTCAGCTTCTGGGTTTTGGCTCATTTGTACCCTTTTGCTAAAGGGCTTAtgggaagaaggggaagaacaCCAACCATTGTGTTTGTGTGGTCAGGCCTAATAGCTATCACAATTTCCCTCCTTTGGGTTGCTATTGACCCTCCTGGAAGCAGCAGTCAAATTGGTGGGTCATTCCAATTCCCTTGA 3279 0.4312 MASSKPQSLRGSSTVRRITQMNNDADGESENGGSVGLATYTVHIPPTPDNQPMEISMERSTSRRVEDQYASSSMFTGGFNQVTRAHLKEKVIESDSSHPQMAGAAKGSPCAVPGCDGRVMPDERGLDIVPCECDYKICRDCYRDALRTGDGICPGCKEPYKELPDSSSDAALPLPSSSPTMSKMERKLSSMKSKSGALVSSQTNDFDHNQWLYETKGSYGYGNAMWPKDSENDSGSEWMAGDPKVFKEKQWKPLTRKLNISAAILSPYRLLIFVRMVVLAFFLKWRVENPNDDAIWLWAMSVVCEIWFAFSWLLDLLPKLCPINRFVDLDVLKEKFETPNPSNPTGKSDLPGIDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPESYFNMKRDPYKNKVRSDFVRDRRRVKREYDEFKVRVNSLSDSIRRRSDAYNAREEIKAMKLWRENGNDEPMGNLKIPKATWMADGTHWPGTWTASTLEHSRGDHASIIQVMLKPPSDEPLTGTTSESNAIDFTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNSLALREGMCFMMDRGGEEICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRTALYGFDPPRTKEEVGWFGRKKSSSVASVPEVSSIEDQSLYNDDEEMSIALIPKRFGNSNLLVDSIRVAEFQGRPLADNPAIKNGRPPGALTLPRDLLDASTVAEAINVISCWYEDKTEWGHRIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAILSSSRMNFLQRIAYLNVGIYSLDVNFLVYLLGITVTLVFLAALEVKWSGIDLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVLAGIEISFTLTSKSAGDDEDDEYADLYIIKWSSLMIPPVTIMMMNLIGISVAVIRTIYSDNPDWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAIDPPGSSSQIGGSFQFP 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1288 1092 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 53 899 - -
Sto11g1288 1092 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 899 1090 - -
Sto11g1288 1092 MobiDBLite consensus disorder prediction 170 185 - -
Sto11g1288 1092 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 171 IPR013083 -
Sto11g1288 1092 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 899 1090 - -
Sto11g1288 1092 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 53 899 - -
Sto11g1288 1092 Pfam RING/Ubox like zinc-binding domain 112 161 - -
Sto11g1288 1092 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 553 724 IPR029044 -
Sto11g1288 1092 Pfam Cellulose synthase 900 1081 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sto11g1288 1092 Pfam Cellulose synthase 353 899 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sto11g1288 1092 SUPERFAMILY RING/U-box 105 167 - -
Sto11g1288 1092 SUPERFAMILY Nucleotide-diphospho-sugar transferases 368 700 IPR029044 -
Sto11g1288 1092 MobiDBLite consensus disorder prediction 162 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1288 Sto-Chr11 12567011 12570835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1288 10 1092 Glycosyltransferase AT3G03050 72.937 0.0 1677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1288 K20924 - gmx:100813900 1783.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1288 11 12567011 12570835 Sto11g1288 11 12567011 12570835 ECH