Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1277 ATGGCTGCTCTGCAATACTTGGAATCGCTGCGCAACGCTCACCCGGAGCTCTCTGATTGGTACAATTCGCTTGCAGATCTGTACCAGAAGAAGCTCTGGCACCAGCTCACTCTCAAGCTCGAGCAGTTCGTGGCTCTTGCTGTTTTCCAGGTATCTTGTGGTTGTTACTTGTTTGTATACTCGGTGGTCATGCTTATTATTAAATTTCAGGCTGGTGACGCTTTGATACAGTTATATCACAATTTCATCACAGATTTTGAGACTAAAATCAATCTTCTCAAGCTTGCCCATTTTGCTGTGATAGTTTCTCGGCAGTATTCTGAGAAAGAGGCTGCCATTGGTTATCTTGATGGAGTCATCGAGAAGCTCCAAGCTACTAAAGAGCAGAGAATAGAAGAACCTATTCTTTACATTAAGATGCAAATAGCATTATTTAAGCTTGAGCAAGGTGACCAAAAGGAATGCAAAAAACTTCTGGAAGATGGAAAGAGTACACTTGACAGCATGACAGATATTGATCCATCTGTTTATGCTAGCTATTACTGGATATCATCTCAGTATCATAAATTCCGCCAGGAATTTGCTGAGTTCTATAAAAGTGCACTTCTCTATCTGGCATACACATCAGTGGAGTCTCTCTCAGAGTCGTTCAAGCTGGATTTGGCATTTGATTTGTCCCTTTCTGCTCTGCTGGGAGATAACATCTACAACTTTGGAGAGCTACTCGCCCATCCTATAATTACTAGTCTTTTGGGGACAAAAGTGGAATGGCTTTACTATATTCTCCAAGCATTCAATTCTGGTGATTTAGTTCGATATCAAGAACTATGCCGGGTACACAATACTGCTTTAAGGGCCCAACCAGCACTGGTTCAGAATGAGCAGAGGTTGTTGGAAAAGATCAACATTCTCTGCTTGATGGAGATTATATTCAGTCGGCCTTCTGAGGATCGAACGATTCCTTTGAGTGTCATTGCAGAGCGTACAAAACTTTCTATAGAGGATGTAGAGCATCTTCTCATGAAGAGCCTTTCTGTTCATCTGATTGAGGGTATAATTGATCAAGTTGAGGGCACGGTGCATGTTTCCTGGGTGCAGCCGAGAGTTCTGGGAATATCACAGATTAAATCCTTGCGGGACCGACTGGACAGTTGGACGGGTAAAGTAAGAACTGCATTGTTATCCATCGAGGCGGAAACACCTGATCTAATTGgttcatga 1221 0.4242 MAALQYLESLRNAHPELSDWYNSLADLYQKKLWHQLTLKLEQFVALAVFQVSCGCYLFVYSVVMLIIKFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYSEKEAAIGYLDGVIEKLQATKEQRIEEPILYIKMQIALFKLEQGDQKECKKLLEDGKSTLDSMTDIDPSVYASYYWISSQYHKFRQEFAEFYKSALLYLAYTSVESLSESFKLDLAFDLSLSALLGDNIYNFGELLAHPIITSLLGTKVEWLYYILQAFNSGDLVRYQELCRVHNTALRAQPALVQNEQRLLEKINILCLMEIIFSRPSEDRTIPLSVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGISQIKSLRDRLDSWTGKVRTALLSIEAETPDLIGS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1277 406 SMART PINT_4 292 385 IPR000717 -
Sto11g1277 406 Gene3D - 86 363 - -
Sto11g1277 406 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 292 385 - -
Sto11g1277 406 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 68 404 IPR035298 -
Sto11g1277 406 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 1 52 IPR035298 -
Sto11g1277 406 ProSiteProfiles PCI domain profile. 194 367 IPR000717 -
Sto11g1277 406 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 HOMOLOG B-LIKE 68 404 - -
Sto11g1277 406 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 HOMOLOG B-LIKE 1 52 - -
Sto11g1277 406 SUPERFAMILY "Winged helix" DNA-binding domain 294 368 IPR036390 -
Sto11g1277 406 Pfam PCI domain 258 363 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1277 Sto-Chr11 12504039 12508194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1277 K03039 - gmx:100804455 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1277 11 12504039 12508194 Sto11g1277 11 12504039 12508194 ECH