Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1275 ATGGTATCAACATTGCCTCCTATACCTATGCTTCCATCTCCTTTCGCGATGAATACTCAAAATTGTAGTAATAATGCCAGCTTCTACTCCTCCTTTCAAGTTTTGAATCCGAGGAAACAGATGGTCTTGGGCGTTCTGTGTGGTGCAAGGCGGCGAGCTAGATTTTCTCGGCAGAATCTAGGGACAACCATGAATCGCCACCACGATCCCAATCCTTTCGAAGAAGAAGTGGTTGAGGTTAATCCCTTTTCGAATGGTGCTGCTGTTCCTGGATCAAAATCACTAAATCCACCATTGTCGTCTGAGCCCCTGGGATTTGGTCAAAGACACGATGCTACAGTTGATATTCCGTTAGATAACATGAATGAgataaaaagaagagaagatgcTGTTTCTAAAGCTGGTGTTCCTGTTGATGATAAAAATTGGCCTccatttttcccaatcattCACCATGATATTGCCAATGAGATACCAGTTCATGCTCAGAGGCTGCAATACCTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTCTGCCTGGTTTTTAATGTAGTTGCTGTGACTGTCTGTTGGATTAGAGGCGGTGgtgttaaaatttttttccttgCGGTGATTTATGCTATACTTGGAGTTCCCCTTTCATACGTGCTTTGGTACAGGCCCCTCTATCGTGCTGTGAGGACAGATAGTGCATTAAAGTTTGGTTGGTTTTTCCTGATCTACTTGCTTCATATTGCGTTTTGTGTCTTTGCTGCTATTGCACCTCCAGTTGTTTTCAATGGAAAGTCATTAACggGAATTCTTGCAGCAATTGATGTCTTCTCAGACCATGTATTTGTTGGGATATTCTATTTGGTTGGGTTCGGCTTGTTTTGCTTGGAGACTCTTCTAAGTTTCTGGGTTCTTCAGAAAGTTTATATGTATTTCAGGGGGAATAAGTGA 942 0.4013 MVSTLPPIPMLPSPFAMNTQNCSNNASFYSSFQVLNPRKQMVLGVLCGARRRARFSRQNLGTTMNRHHDPNPFEEEVVEVNPFSNGAAVPGSKSLNPPLSSEPLGFGQRHDATVDIPLDNMNEIKRREDAVSKAGVPVDDKNWPPFFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVTVCWIRGGGVKIFFLAVIYAILGVPLSYVLWYRPLYRAVRTDSALKFGWFFLIYLLHIAFCVFAAIAPPVVFNGKSLTGILAAIDVFSDHVFVGIFYLVGFGLFCLETLLSFWVLQKVYMYFRGNK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1275 313 Pfam SCAMP family 141 311 IPR007273 GO:0015031|GO:0016021
Sto11g1275 313 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 123 313 IPR007273 GO:0015031|GO:0016021
Sto11g1275 313 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 64 123 IPR007273 GO:0015031|GO:0016021
Sto11g1275 313 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 4 64 123 - -
Sto11g1275 313 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 4 123 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1275 Sto-Chr11 12486916 12493862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1275 64 313 Miscellaneous Gene Families AT1G32050 68.635 5.78e-138 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1275 K19995 - gmx:100780723 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1275 11 12486916 12493862 Sto11g1275 11 12486916 12493862 ECH