Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1211 ATGGAATCCAACGACGTGTTAGAGGAGCTGCTAATCGTAGAGGCTGAGATTCAGGATGTCGAAGATCAAATAAGGGCATTGATTGAAAGACAGGATAAGTTGTATGAGAGGAAATCAGAGCTGAAGGCTATCCTGGAAGCATGTGAAGAATCTGGAAAGCAGGTCAATAGTGGTGCTCCAGGTACTGTGGAAGATTGGTCTGGGCCATTTGAATGGGATTCTGAAGCAGATGATGTCAGACTGAATATTTTTGGCATTTCATCATATCGTTTAAATCAAAGAGAGATTGTTAATGCCGTCATGAGTGGAAGGGATGTTCTAGTGATTATGGCTGCGGGTGGTGGCAAGAGCCTCTGCTACCAGCTTCCTGCTGTTCTTCGTGATGGAATTGCTCTTGTTGTTAGTCCTTTGATTTCCTTAATTCAGGATCAGGTAATGGGTTTGACTGCTTTAGGCATCCCAGCATATATGTTGACATCAACAACAAGTAAGGAAGACGAGAAGTTCATATACAGGGCTCTGGAAAAGGGTGAGGGGGATCTCAAAATATTGTACGTCACACCAGAAAAGATATCAAAGAGCAAGAGATTTATGTCAAAACTCGAAAAATGCCATCATGCTGGTCGTCTCTCTCTAATTTCAATAGATGAAGCACATTGCTGTAGTCAGTGGGGTCATGACTTCCGACCTGACTACAAAAACCTCAGTATTCTCAAGACTCAATTTCCTAATGTTCCATTAGTTGCTTTGACTGCAACTGCTACTCAAAGGGTCCAAAATGATCTGATTGAGATGTTGCACATTCCGAGATGTGTCAAATTTGTCAGCACAGTCAACAGACCAAACCTATTTtacatgGTAAAGGAAAAGTCATCTGTTGGTAAAGTGGTTATTGATGAAATTGCTGAATTCATTCAAGTATCTTATCCAAATAAGGAATCTGGGATAGTTTATTGCTTCTCTAGGAAAGAATGTGAACAGGTTGCAAAGGAGTTACGGGAGAGGGGAATTTCATCTGATCATTATCATGCAGATATGGATGTACATGCTCGGGAAAAAGTACATATGCGTTCTTGCTTGGCTGTGCTGAATCCATTGTCATTGGAAAGTGGAGTTATACTTGCTGgtgttttagaaactaaatGA 1146 0.4049 MESNDVLEELLIVEAEIQDVEDQIRALIERQDKLYERKSELKAILEACEESGKQVNSGAPGTVEDWSGPFEWDSEADDVRLNIFGISSYRLNQREIVNAVMSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTALGIPAYMLTSTTSKEDEKFIYRALEKGEGDLKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPNVPLVALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQVSYPNKESGIVYCFSRKECEQVAKELRERGISSDHYHADMDVHAREKVHMRSCLAVLNPLSLESGVILAGVLETK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1211 381 Coils Coil 3 37 - -
Sto11g1211 381 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 97 272 IPR014001 -
Sto11g1211 381 Pfam DEAD/DEAH box helicase 93 259 IPR011545 GO:0003676|GO:0005524
Sto11g1211 381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 272 IPR027417 -
Sto11g1211 381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 354 IPR027417 -
Sto11g1211 381 Gene3D - 48 279 IPR027417 -
Sto11g1211 381 PANTHER ATP-DEPENDENT DNA HELICASE Q1 8 357 - -
Sto11g1211 381 SMART ultradead3 85 288 IPR014001 -
Sto11g1211 381 CDD DEXHc_RecQ1 71 279 - -
Sto11g1211 381 Gene3D - 280 360 IPR027417 -
Sto11g1211 381 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 82 357 IPR004589 GO:0004386|GO:0006310
Sto11g1211 381 PANTHER DNA HELICASE RECQ FAMILY MEMBER 8 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1211 Sto-Chr11 12028498 12033795 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1211 K10899 - gmx:100817635 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1211 11 12028498 12033795 Sto11g1211 11 12028498 12033795 ECH