Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1169 ATGAAATTTATGAAACTAGGATCCCGTCCAGATACCTTCTACACTTCAGAGGCAGTAAGGTCCATCTCTTCTGAAGTTTCCAGCGACCTCATCATTCAAGTGAAAGCAACTAGATATCTTCTTCATAAGTTTCCCCTACTCTCCAAATGCCTGCTCCTACAAAGGCTATGCTCAGAATCACCTGATTCTTCTCAGCACCAGCTAGTCCAACTCCCTGATTTCCCCGGTGGAGTGGAGGCCTTTGAACTGTGTGCTAAGTTCTGCTATGGTATTACCATCACTCTCTGTGCTTACAACATTGTAGCTACTCGATGTGCTGCTGAATACTTACACATGACAGAGGATGTGGAGAAGGGGAACCTAATATGTAAGCTTGAGGTGTTTCTCAACTCTTGTATTCTTCAAGGTTGGAAGGATTCTATAGTGACTCTACAGAGCACCAAAGCATTGCCTTTGTGGTCAGAGGACTTAGCAATTTCAAGCAGATGCATTGAAGCAATTGCCTCAAAAGTCTTGAGCCACCCCTCCAAGGTCAGTTTGTCACAGAGTCATTCCAGAAGGGTAAGGGATGATATTTCTTACAATGGAAACGAAAGTCAAAGGCACACATCATCATCAAGTAAGGGATGGTGGGCTGAGGATTTAGCAGAATTGAGCATGGACCTGTATTGGAGAACCATGATAGCTATGAAATCTGGCAGCAAGATGCCCTCAAATATCATAGGTGATGCACTAAAAGTTTATGCATCTCGTTGGCTTCCCAATATCTCAAGAAAAGCACGTTCCAATAAGAAAGCAGCAGCATCTGGCTCTGATTCAGACTCTGCAAGTGAAATAACCTCAAAGCATCGTTTGCTTTTGGAATCAATAGCAAGCTTGCTTCCAGCAGAGAAAGGTGCTGTTTCTTGTAGTTTCCTTCTTAAACTATTAAAGGCGGCCAACATTCTCAATGCTTCTTCCTCTTCAAAAATGGAGTTAGCTAGAAGAGTAGGACTTCAGTTGGAGGAAGCCACAGTGAATGATCTTTTAATGCCCTCCTTGTCCCACACCAACGATATGCTGTATGATGTTGATTTGGTGATGACCATATTGGAGCAATTTATGTCACAAGGTCAGAGTCCCCCAACCAGCCCACCAAGATCCAGGCTGTCTGTTGAAAGAAGGAGATCACGTTCAGCAGAGAATATTGATTCTGAGTTCCAGGAGAGTAGGAGGTCGTCTTCTGCATCTCACAGCTCAAAATTGAAGGTGGCAAAACTTGTGGATAGGTATCTTCAAGAGGTTTCCAAGGATGTAAATTTGCCTATGTCCAAGTTTATTGCTTTTGCTGAAATTATACCAGATTTTGCAAGACATGACCATGATGATCTCTACAAAGCCATTGACATTTATCTCAAGGCTCATCCAGAACTGAACAAGAGTGAAAGGAAAAGACTATGTCGAATCCTTGACTGCAAAAAACTGTCTATGGAAGCCTGCATGCATGCAGCCCAGAATGAAGTACTTCCCCTAAGGGTGGTCGTTCAAGTACTCTTCTTTGAGCAAGCCAGAGCTGCAGCATCTGGTGGCAAAGTGAGTGACTTGCCTAGCAACCTCAAGGCACTACTTACTGCACATGGAATGGACCCATTAAAGCACGCAGCTCCTTTAAGCACTACTACAAGTTTACATGCAGATGACCAATGGAGTGATTCTGGCTTCAAGATGAAGCTGGCTGAGGATGATGACTTAGATGAGAATGATCTTTCCCGCAATGGTATTGCAAGAACTTCAAAGTTTAAGGCCTTTTGTGCTCTTCCTACCCAACCCAAAAGAATGCTTAGTAAGTTCTGGTCCACCAATAGAGGCACTAGTGAAAAGAATTGA 1866 0.4341 MKFMKLGSRPDTFYTSEAVRSISSEVSSDLIIQVKATRYLLHKFPLLSKCLLLQRLCSESPDSSQHQLVQLPDFPGGVEAFELCAKFCYGITITLCAYNIVATRCAAEYLHMTEDVEKGNLICKLEVFLNSCILQGWKDSIVTLQSTKALPLWSEDLAISSRCIEAIASKVLSHPSKVSLSQSHSRRVRDDISYNGNESQRHTSSSSKGWWAEDLAELSMDLYWRTMIAMKSGSKMPSNIIGDALKVYASRWLPNISRKARSNKKAAASGSDSDSASEITSKHRLLLESIASLLPAEKGAVSCSFLLKLLKAANILNASSSSKMELARRVGLQLEEATVNDLLMPSLSHTNDMLYDVDLVMTILEQFMSQGQSPPTSPPRSRLSVERRRSRSAENIDSEFQESRRSSSASHSSKLKVAKLVDRYLQEVSKDVNLPMSKFIAFAEIIPDFARHDHDDLYKAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNEVLPLRVVVQVLFFEQARAAASGGKVSDLPSNLKALLTAHGMDPLKHAAPLSTTTSLHADDQWSDSGFKMKLAEDDDLDENDLSRNGIARTSKFKAFCALPTQPKRMLSKFWSTNRGTSEKN 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1169 621 SUPERFAMILY POZ domain 21 116 IPR011333 -
Sto11g1169 621 ProSiteProfiles NPH3 domain profile. 209 517 IPR027356 -
Sto11g1169 621 Gene3D Potassium Channel Kv1.1; Chain A 15 118 IPR011333 -
Sto11g1169 621 MobiDBLite consensus disorder prediction 368 408 - -
Sto11g1169 621 MobiDBLite consensus disorder prediction 382 401 - -
Sto11g1169 621 Pfam NPH3 family 210 493 IPR027356 -
Sto11g1169 621 PANTHER OS12G0117600 PROTEIN 1 617 IPR043454 -
Sto11g1169 621 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1169 Sto-Chr11 11604934 11607745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1169 26 523 EF-hand Containing Proteins AT3G44820 35.453 1.08e-92 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1169 - - gmx:100797361 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1169 11 11604934 11607745 Sto11g1169 11 11604934 11607745 ECH