Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1135 ATGGATGAATTCGAACAGTGGAAGGAACAAGTGGTTCACTGGTGGAATCTGGGTTTGGAATATCTTCATCAGGTTCCCCCAACTCAGCTCTATGCTGCCGCTGCTGTCTTGGCGTTTACAACGTTTCTGCTTCTGTTAACAGTTCGCTTGTTCAAACGTGCAAAGTCTCATACCATTGTACTGACTGGCCTTAGTGGGAGTGGGAAGACTGTTCTATTCTATCAACTTAGGGATGGCTCTACTCATCAGGGCACTGTTACATCAATGGAACCTAACGAGGGCACCTTTATTCTTCATTCTGAAACAACAAAGAAGGGGAAGATAAAACCTGTTCATATTGTTGATATTCCCGGGCATTCTCGTCTTCGACCCAAACTGGACGAGTACTTGCCTAAAGCAGCTGGCATAGTTTTTGTGGTTGATGCTTTGGAATTTTTACCAAACTGCCGTGCTGCTTCAGAGTATCTGTATGATATTCTAACTAAGGGAAGTGTCGTGAAGAAGAAGATTCCACTGCTTATCCTTTGCAACAAAACAGATAAAGTCACTGCTCATTCCAAGGAGTTTATCCGCAGACAGATTGAGAAGGAAATTGATAAATTGCGAGCATCAAGAAGTGCAATATCAGATGCTGACATTGCAAACGAGTTCACCCTTGGGGTTGCTGGAGAACAATTTTCCTTTTCCCAGTGCTATAACGAAGTTACAACTGCGGAAGCTTCTGGTTTGAATGGGGAGATATCTCAGTTGGAACAGTTCATCAGAAAATATGTAAAGCCATAG 783 0.4304 MDEFEQWKEQVVHWWNLGLEYLHQVPPTQLYAAAAVLAFTTFLLLLTVRLFKRAKSHTIVLTGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHSETTKKGKIKPVHIVDIPGHSRLRPKLDEYLPKAAGIVFVVDALEFLPNCRAASEYLYDILTKGSVVKKKIPLLILCNKTDKVTAHSKEFIRRQIEKEIDKLRASRSAISDADIANEFTLGVAGEQFSFSQCYNEVTTAEASGLNGEISQLEQFIRKYVKP 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1135 260 ProSiteProfiles small GTPase Arf family profile. 50 254 - -
Sto11g1135 260 CDD SR_beta 57 257 IPR019009 -
Sto11g1135 260 Pfam Signal recognition particle receptor beta subunit 55 235 IPR019009 -
Sto11g1135 260 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 3 260 IPR019009 -
Sto11g1135 260 Gene3D - 51 258 IPR027417 -
Sto11g1135 260 Coils Coil 191 211 - -
Sto11g1135 260 PANTHER TRANSFERRIN 3 260 - -
Sto11g1135 260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 206 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1135 1 260 Miscellaneous Gene Families AT5G05670 71.923 2.88e-140 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1135 K12272 - gmx:100800572 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1135 11 11363230 11365537 Sto11g1135 11 11363230 11365537 ECH