Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1134 ATGGTGATGATAGTAGCATCACTTCCAGGTGGTAACCTCTTCTCTTCCTTACCTTCAACACCACCACCTACTGATCCCACCGTAACCACTTCCACTCCTTCCCCTCCAATCCCAATTCCCAAATACCCACCTCCTCGCAGATCCCGCATCTCCCAACCAAACCCTCCTGAACCTTCAAACCCCACACCCAATCCTCCCGCCCTCAAGTACCATCGCAACTCCAAGTACTACAAACCCGTCAGAGATGGCGTTATTGCATCAGAAGGCGATCGCGCCGTCGTCATCGGTGAGTCCGGCGTGTCCTACCTCCTTCCCGGAGCTCCATTCGAGTTCCAGTTTAGTTATACCGAGACGCCGAAGGTGAAGCCGCTGGCGATTCGGGAGCCGGCGTTCTTGCCCTTCGCGCCGCCGACAATGCCGAGGCCGTGGACTGGGAAGGCGCCATTGAAGAGCTCGAAGAAGAAGATTCCGCTCTTTGATTCTTTCAATCCTCCCCCGCCGGGTACGAAAGGAGTGAAGCAAGTTGAAATGCCAGGGCCGTTTCCACTAGGGCAATATCCCAAGGAGGGGAAGACGAGGGAGGAGATACTTGGGGAGCCTTTGAAGAAGTGGGAGATTAGAATGCTTGTGAAGCCTATGTTGGGTGATAATCGCCAGGTTAATCTTGGAAGGGATGGATTAACACATAACATGTTGGAGTTGATACATTCACATTGGAAGCGATCCCGTGTCTGTAAAGTTCGTTGTAAAGGTGTTCCAACAGTAGATATGGATAATGTTTGCCATCATCTTGAGGAGAAAACAGGGGGGAAAATAATTCATCGAGTTGGTGGTGTAGTTTACCTTTTCCGTGGTAGAAATTACAACTATCGTACTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCTGCTCCAGTTTACCCCAAACTTATCCAAGAAGCTCCAGAAGGATTAACTAAAGCTGAAGCTGATGGAttccgtaagaaaggaaaaaagctATTgccaatatgtaaattatCTAAAAATGGAGTCTACACTTCCCTCGTGAAAGATGTAAGACATGCTTTTGAAGGAAGTCCTTTGGTGAAGATTGACTGTACGGGATTGGAACCCAGTGATTACAAGAAAATAGGTGCCAAGCTTAAGGAATTGGTTCCTTGTGTGCTGTTGTCTTTTGATGATGAACAGATACTGATGTGGAGGGGGAAAGATTGGAAATCAATGTACCCAGAAACTCCTCCAGTTTCAAGTTTTCCTGAAGTTGGCATTGCAAGGAACTTGGACAAGTCAGGTAACACTGATGATGATCAAAGGAAGCATGATAGCACCATGATGAACACAAGCTCTAAAATGTTGTCTCTGTGGAAGCGTGCGATTGAATCGAGCAAAGCTTTGTTACTGGATGAGATTAATGCTGGTCCTGATGCTCTGTTGGAGAAGGTAGAGGAATTTGAGCGTATTTCACAGGCCACAGAACACTCCTATCCAGCATTTATTTCATCAGGTGAAGATGGTGCTAAAGGTTCAATTGCAGACTTTGAAGACACTTATTCTAGTGATGAGTACGATGAGTATGATGaatatgatgatgaagatgaatcaAATGATGTGAGAGGTCAGAGTAATCTCTCTTTGATCATTCATGCATTCCGGTATGATTGA 1665 0.4523 MVMIVASLPGGNLFSSLPSTPPPTDPTVTTSTPSPPIPIPKYPPPRRSRISQPNPPEPSNPTPNPPALKYHRNSKYYKPVRDGVIASEGDRAVVIGESGVSYLLPGAPFEFQFSYTETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGQYPKEGKTREEILGEPLKKWEIRMLVKPMLGDNRQVNLGRDGLTHNMLELIHSHWKRSRVCKVRCKGVPTVDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKAEADGFRKKGKKLLPICKLSKNGVYTSLVKDVRHAFEGSPLVKIDCTGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPETPPVSSFPEVGIARNLDKSGNTDDDQRKHDSTMMNTSSKMLSLWKRAIESSKALLLDEINAGPDALLEKVEEFERISQATEHSYPAFISSGEDGAKGSIADFEDTYSSDEYDEYDEYDDEDESNDVRGQSNLSLIIHAFRYD 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1134 554 Gene3D - 200 296 IPR035920 -
Sto11g1134 554 Gene3D - 319 413 IPR035920 -
Sto11g1134 554 SMART CRS1_YhbY_2 201 284 IPR001890 GO:0003723
Sto11g1134 554 SMART CRS1_YhbY_2 319 402 IPR001890 GO:0003723
Sto11g1134 554 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 5 536 - -
Sto11g1134 554 ProSiteProfiles CRM domain profile. 317 413 IPR001890 GO:0003723
Sto11g1134 554 ProSiteProfiles CRM domain profile. 199 295 IPR001890 GO:0003723
Sto11g1134 554 MobiDBLite consensus disorder prediction 517 535 - -
Sto11g1134 554 Pfam CRS1 / YhbY (CRM) domain 319 402 IPR001890 GO:0003723
Sto11g1134 554 Pfam CRS1 / YhbY (CRM) domain 203 284 IPR001890 GO:0003723
Sto11g1134 554 MobiDBLite consensus disorder prediction 430 444 - -
Sto11g1134 554 MobiDBLite consensus disorder prediction 417 446 - -
Sto11g1134 554 MobiDBLite consensus disorder prediction 12 71 - -
Sto11g1134 554 MobiDBLite consensus disorder prediction 19 65 - -
Sto11g1134 554 SUPERFAMILY YhbY-like 200 294 IPR035920 -
Sto11g1134 554 MobiDBLite consensus disorder prediction 510 540 - -
Sto11g1134 554 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 5 536 IPR044599 GO:0000373
Sto11g1134 554 SUPERFAMILY YhbY-like 319 410 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1134 Sto-Chr11 11351636 11357624 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1134 - - zju:107428670 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1134 11 11351636 11357624 Sto11g1134 11 11351636 11357624 ECH