Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1131 ATGATCATCCCTGTTCGTTGTTTCACCTGTGGCAAGGTCATCGGAAACAAGTGGGATACGTATCTGGATCTTCTACAGGCCGACTACAGTGAAGGAGATGCATTGGATGCGTTGGGTTTGGTTCGTTATTGCTGCAGAAGAATGCTAATGACCCATGTTGATCTCATCGAGAAGCTTCTGAACTACAATGGTAATTCATCTTCCTCAATTATTCTGTTTGGGTGTGTATCAGTTTTGTATTAG 243 0.428 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNGNSSSSIILFGCVSVLY 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1131 80 PIRSF RpoN_RPB10 1 72 IPR000268 GO:0003677|GO:0003899|GO:0006351
Sto11g1131 80 Gene3D - 1 66 - -
Sto11g1131 80 Hamap DNA-directed RNA polymerase subunit Rpo10 [rpo10]. 2 56 IPR000268 GO:0003677|GO:0003899|GO:0006351
Sto11g1131 80 Pfam RNA polymerases N / 8 kDa subunit 2 59 IPR000268 GO:0003677|GO:0003899|GO:0006351
Sto11g1131 80 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER 1 65 IPR000268 GO:0003677|GO:0003899|GO:0006351
Sto11g1131 80 SUPERFAMILY RNA polymerase subunit RPB10 1 63 IPR023580 -
Sto11g1131 80 ProSitePatterns RNA polymerases N / 8 Kd subunits signature. 2 11 IPR020789 GO:0003677|GO:0003899|GO:0006351|GO:0008270
Sto11g1131 80 PANTHER - 1 65 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1131 K03007 - gmx:100500450 136.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1131 11 11337645 11338749 Sto11g1131 11 11337645 11338749 ECH