Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1129 ATGAACAAATTCTTCCTTCTTGTCTTACTCAGTTTGCTAATAGCAGCTCATGGAGTTGCAGGAAACATGTTATGTGACAACATTGGCATACTTGAAGAACTTCAAAGCATGgacatagaagaagaagaagaaaatgaggtAGAACTTTCTGAGATCCCTTCATGGAATAGTGAGCGTGGTGGAAAGGTTCTTGTAAATGTAGATAGCTTTGGTGCTGTTGGAAATGGAGAATCTGATGATACTCAGGCTTTCAGAAAAGCTTGGGATGTTGCTTGCTCTACACCAAAATCTGTGTTCTTAGTTCCCCAAGGACGTCGTTACCTAGTTAATGCCACAAGATTCAAAGGGCCTTGCGCAGACAAGCTAATTATTCAGATTGATGGAACAATTATAGCACCAGATGAGCCTAAGAACTGGGATCCGAATTTGCCACGGATTTGGCTTGATTTTTCCAAGTTGGATAAAGCTGTTTTCCAAGGTGCAGGAGTAATTGATGGCTCGGGAAGCAAATGGTGGGCAGCATCTTGCAAAAAAAATAAGTCAAACCCCTGCAGAGGTGCTCCAACCGCATTAACCATTGATTCAAGCTCAGCTATAAGGGTTAAAGGACTAACTATCCAGAATAGCCAGCAAATGAATTTTGTCATATCACGATGCGATTCTGTTCGAATTAACGCTGTGAAAGTATCAGCACCAGGAGACAGCCCAAACACTGACGGAATTCACATAAGTGAATCAACAAATGTAGTACTCCAAAACTGCAAGATTGGAACAGgagatgattgcatatCCATTGTCAATGCTAGCTCTAATATCAAAATGAAGAGGATTTATTGTGGACCAGGACATGGAATCAGTATTGGAAGCCTTGGGAAAGACAACTCCACTGGCATAGTCACAAAGGTGATTTTGGATACAGCAGTTATTAGGGAGACTACAAATGGTCTCAGGATTAAGACTTGGCAGGGAGGTTCTGGCTATGTTCGTGGGGTTCGCTTTCAGAATGTGCAGATGGACAACGTATCAAACCCCATAATTATAGATCAGTTCTACTGTGACTCACCAACAACTTGTGAAAACCAGCCATCAGCTGTGAAGATAAGTGAGGTAATGTACCAGAACATCAGTGGGACAACGATTAGCGCGAAAGCCATTAAATTTGACTGCAGTGACTCAGTTCCATGTAGCAACCTTGTACTCAGCAACGTTGACTTGGAGAAAGAGGATGGCACAGTGGAGGCATACTGCCACTCTGCTCAGGGATTTGGATATGGGGTTGTGCATCCTTCTGCAGATTGCCTCAATTCCGACGACAAACGTGCTGAAATTGCAGAACCAATTACAGAGGATATTCGTCACACTGAACTATAA 1371 0.415 MNKFFLLVLLSLLIAAHGVAGNMLCDNIGILEELQSMDIEEEEENEVELSEIPSWNSERGGKVLVNVDSFGAVGNGESDDTQAFRKAWDVACSTPKSVFLVPQGRRYLVNATRFKGPCADKLIIQIDGTIIAPDEPKNWDPNLPRIWLDFSKLDKAVFQGAGVIDGSGSKWWAASCKKNKSNPCRGAPTALTIDSSSAIRVKGLTIQNSQQMNFVISRCDSVRINAVKVSAPGDSPNTDGIHISESTNVVLQNCKIGTGDDCISIVNASSNIKMKRIYCGPGHGISIGSLGKDNSTGIVTKVILDTAVIRETTNGLRIKTWQGGSGYVRGVRFQNVQMDNVSNPIIIDQFYCDSPTTCENQPSAVKISEVMYQNISGTTISAKAIKFDCSDSVPCSNLVLSNVDLEKEDGTVEAYCHSAQGFGYGVVHPSADCLNSDDKRAEIAEPITEDIRHTEL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1129 456 PANTHER BNAA08G20470D PROTEIN 2 443 - -
Sto11g1129 456 SUPERFAMILY Pectin lyase-like 63 434 IPR011050 -
Sto11g1129 456 ProSitePatterns Polygalacturonase active site. 276 289 IPR000743 GO:0004650|GO:0005975
Sto11g1129 456 PANTHER - 2 443 - -
Sto11g1129 456 Pfam Glycosyl hydrolases family 28 96 417 IPR000743 GO:0004650|GO:0005975
Sto11g1129 456 Gene3D - 54 453 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1129 Sto-Chr11 11325015 11327918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1129 23 441 Glycoside Hydrolase AT1G23460 73.031 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1129 - - gmx:100806068 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1129 11 11325015 11327918 Sto11g1129 11 11325015 11327918 ECH