Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1127 ATGGTCTTGCAGATCACTATTAATAGGCCAGAGAGAAGGAATGCTTTCGGTCCCCATACCATTAAGGAGCTTATTCGTGCTTTTAATGATGCCAGAGATGATAGCTCTGTGGGTGTCATCATTCTCACTGGGAAGGCTTTCTGTAGTGGTGGTGACCAGAAATTGGGGACCAAAGATGCTTATGCTGATAATTGGTTAGACTTGCAGGTCCAGATCCGTCGGCTTCCGAAACCAGTAATTGCTATGGTAGCAGGTTTTGCCATTGGAGGAGAACAAATGCTACATATGATGTGTGATCTAACTATTGCAGCAGATAATGCCATATTTGGCCAAATTGGTCCCAAGGTAGGAAGCTTTGATGCTGGTTATGGAAGTTCGATCATGTCACGCTTGATAGGACCCAAAAAGGCACGTGAAATGTGGTTTCTCACAAGGTTCTATAATGCTGATGAAGCAGAGAAAATGGGCCTTGTCAATACTGTTGTACCATTAGAGaagttagaaaaagaaagagtgaAATGGTGTCGAGAGATTCTGAGGAACAGCCCAACTGCAATTCGGGTTCTCAAGTCAGCTCTTAATGCCGAGGATGATGGCCATGCTGGACTTCAGGAACTTGGTGGAAACGCAACACTCATATTTTATGGCACTGAGGAAGCTAACGAGGGAAAGACAGCATTTATGCAACGTAGAGCCCCAGAGTTTTCAAAGTTTCATAGGAAACCtcaatttcacatgtttattaGTCTAGTACTTTTGAATACTCGAGTGAGTGACGGAGCTTACCTCTCTGGTTTTTGA 801 0.422 MVLQITINRPERRNAFGPHTIKELIRAFNDARDDSSVGVIILTGKAFCSGGDQKLGTKDAYADNWLDLQVQIRRLPKPVIAMVAGFAIGGEQMLHMMCDLTIAADNAIFGQIGPKVGSFDAGYGSSIMSRLIGPKKAREMWFLTRFYNADEAEKMGLVNTVVPLEKLEKERVKWCREILRNSPTAIRVLKSALNAEDDGHAGLQELGGNATLIFYGTEEANEGKTAFMQRRAPEFSKFHRKPQFHMFISLVLLNTRVSDGAYLSGF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1127 266 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 1 241 IPR010198 GO:0008935|GO:0009234
Sto11g1127 266 Gene3D - 182 230 IPR014748 -
Sto11g1127 266 SUPERFAMILY ClpP/crotonase 2 237 IPR029045 -
Sto11g1127 266 CDD crotonase-like 2 178 - -
Sto11g1127 266 Gene3D - 1 181 - -
Sto11g1127 266 TIGRFAM menB: naphthoate synthase 3 238 IPR010198 GO:0008935|GO:0009234
Sto11g1127 266 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 3 242 IPR010198 GO:0008935|GO:0009234
Sto11g1127 266 Pfam Enoyl-CoA hydratase/isomerase 2 236 IPR001753 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1127 Sto-Chr11 11307915 11310095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1127 2 242 Acyl Lipid Metabolism Gene Families AT1G60550 80.876 2.90e-150 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1127 K01661 - gmx:100807101 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1127 11 11307915 11310095 Sto11g1127 11 11307915 11310095 ECH