Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1113 ATGCAAAAACAGTACCTCAGCCTTAGCCTTCCCTTCCTTCTCTTTATCATCTTGTCCTTCACTGCTGGTTTCGCCGTCGCCATCGCCACCGGTGGGATCTCCGGCGATGCGGTGGCCGGAGAGAAGAACCCATTCAGCCCAAAGGCATTTCTGATTCGGTATTGGGACAGAAAGATAACCAACAAATTGCCAAAACCATCGTTTCTCCTCTCCAAAGCTTCTCCATTAACCGCTAAGGAATCCGCAGCATTCACGAGACTCGCCGCAAGCAACGCGCTCTCCACGCGCCTCCCTGAATTCTGCTCTTCTGCTCACCTCCTCTGTTTCCCCGATCTAGGAGCCACCTTAGAGAAACACAGTAATAACAACGCCAAATTCACATCGTACCACGACAAGAAATTCACCAACTATGGAACGGGAGGTCGACCCGGCGGAGAAGACTCCTTCAAGAACTATTCCAACGGTTACGCCAACGACGTGCAGAACGGTTTCCGGCGATACAGCCGAGGCTCTACCGACCACAGGGACAACTTTCAGATCTATGGGCCCGGAGGCAACATTGTGGGCCAGAGCTTCAAAACATACGGCGCCGGAGCTAACGGCAGCGGCGGCGACTTCAAGCAGTACGGTCATTCAATCAACATCCCGGAGATGAACTTCACGTCCTACTCCGATGATGCCGATGGAAGAAGCCAGACATTCTCCAGCTATACCGAAGACGGAAATGTAGGTAACCAATCATTTACGAGCTACGGCAAAAATAGCGATGAAGCTTCGAACGCTTTCTCGCTATACTCCACCTTCTCCAACCTTATTAGATCTAACTTCACAAATTACGGCGAGAATTCCAATGGCGAGATTGATAAATTCACAAGTTACTCAAATGACACCAACGGTCTTGCAAATAACTTCAACAACTACGGATCTGGTGGGAATGGAGCAATTAATAGCTTCACTAATTACAGACGATTCTCCAATAATGTGGAAGATTCCTTCGAGTCCTATGCTAAGAACTCCAACGCAACACAGATTGATTTCGCCACTTATGGGAAAGAAGTAAACACAGGCAGAGACTCATTCACTGGGTACGGCAAGGATGCCAAGGGACAAAAGGTTGGGTTCAAGCAATATTTTAGCTTCAACGTCACCAATACCTTTGATTTCAAGGAGTATGCCAAAAATGGTGTCTCCTTCAAGAAATACACTAATGAGAGCTCCTTGTTGGATGCCTCCATGGCGTCCAAGTCAACCAGTGGCAGATTGGCAAATAAGTGGGTGGAGCCGGGTAAGTTCTTCCGTGAGTCTATGCTGAAAGAAGGGGTTGTGATGCCTATGCCTGATATAAGAGATAAAATGCCTCTAAGGTCATTTTTGCCACGGTCCATTTTGTCAAGATTACCGTTTTCCACATCCAAAATCTCTGAGCTAAAGCAAATTTTCAAAGCTGCTGATGATTCATCCATGGAGAAGATTATAATGAATTCACTGAGTGAGTGCGAGAGGGCACCGAGCCGAGGTGAGACCAAGCGATGCGTGGGCTCGATAGAGGATATGATTGACTTTGCCACTTCAGTGTTGGGTCGTGACGTGGCAGTTCGAACTACGGAGAATGTAAATGGGTCGAAGAAGAATGTGGTGGTGGGTTCAATCAAACCAATAAATGATGGTAAGGTCACCCAATCTGTCTCGTGCCACCAGAGCTTGTTCCCTTACCTTCTTTATTACTGCCACTCTGTACCAAAAGTTCGGGTATACGAAGCTGATCTATTGGATCCAAAAACAAAGGCTAAGATTAACCACGGTGTTGCCATTTGTCACTTGGACACGTCAGCTTGGAGTGCAACCCATGGAGCATTCGTATCTCTCGGATCTGGTCCAGGTCGTATCGAAGTTGGTTTCGCCATCGCCAACACCGTTGGAAGCTCCGGCGATGCGGTGGGCGGAGAGAAAAACCCATTCAGCCCAAAGGCATTTCTGATTGGGAGGAGGCAGACGTTCTCCAGTTACACCGAAAACGCAAATACAGGGGACCAAACATTTACTAGCTACGGCAAAAATGGGAAGCAAGCTTCCAACGATTTCACAAATTATGGGACCAACACGAGTAGTATTGAATTTGGAACTAACTTCACAAATTACGGCGAGACTGCCATTGGTGCGGTTGATACATTCGCAAATTACGGAAACATTACCAACATTCTTCAAAGTAACTTCATCAACTATGCAGATGCCGGGAATGGAGCAATCGATAGCTTCATTAATTACTCGAATGGATCACAAGTTGATTTCACGACTTACGGCAGAGAAGCAATCCAAGGCACTGACACATTCACTGGGTATGGCAAGGATGCCAAGGGACAAAAGGTTGGGTTTAAGGAATATTTTAGCGTCAATGTCAGTAATGCCTTTGATTTCAAGGAATACTCCAAGAATGGTGTCTCCTTCAAGAAATACACTAATGAAAGCTCCTTGTTGGATGCTTCCATGGCATCCCAGTCAGCCAGTGGCAGTTTCGCAAATAAGTGGGTTGAGCCGGTTGCCGATGATTCATTCATGGACAAGACCATAATGAGGTCATTGAGTGAGTGCGAGAGGACACCGAGCCGAGGTGAGACCAAGCGGTGCGTGGGCTCAATTGAGGACATGATTGACTTTGCCACTTCGGTGCTAGGTCGTGACGTGACTGTTCGAGCTACGGAGAATGTAAATGGGTCGAAGGAAAATGTGATGGTGGGTTCAATTAAACGAATCAATAGTGGCAAGGTCACGCAGTCTGTCTCGTGTCACCAAAGCTTGTTCCCTTACCTTCTCTATTATTGCCACTCTGTCCCAAAGGTTCGGGTATACGAAGCGGATTTATTAGATTCAAATACGAAGACTAAGATTAACCACGGTGTTGCCATATGTCACTTGGATACATCAGCTTGGAGTGCAACCCATGGAGCCTTCTTGGCTCTCGGGTCGGGTCCAGGTCGAATTGAAGTTGGTTTCGCCATCGCCACCACCGTGGGGAGCTCTCGCGATGTGGTCGCCGGAGAAAAAAACCCATTCAGCCCAAAGGCATTTCTGATTCGGTATTGGGACAAAAAAATCACCAACAAATTGCCTAAACCATCGTTTCTCCTCTCAAAAGCTTCTCCATTAACCGCTACGCAATCCGCAGCATTCACCAAACTCGCCTCAAGCAACGCGCTCTCCACGCGCCTCCCTGAATTCTGCTCCTCTGCTCACCTCCTCTGTTTCCCGGATCTAAGAAGCAACTTAGAGAAACACAATAATGATAGTAACAAATTCACATCGTACCAAGAATACAAAGACTTCAAGAACTACGGAACCGGTGGTGGACCCGGCGGAGAAAACTCCTTCAAGAACTATTCCAACCCTGATTTCGGCGACATGTTTAACGATTTCCGGCGATACAGCCGAGGATCCACCGGCCACAAGGACAATTTTCAGAGCTATGCCAACGGAGGCAACGATGTCGGCGAAACCTTCAGCACATACGGCGCCGGGGCCACCGCTGGAGCCGGCGACTTCAAGAAGTATACTGATTCAATCAATGTCAACGAAGTCCATTTCACTTCCTACTCCGATGATGCCAACGGGAGGAGCCAAACGTTCACTAGTTACACTGAAAACTCAAATGGAGGAGACCAAACATTCTCTGGCTACGGCAAAAATGGCGAGAAAAATTCAAACGATTTCAAAAAATACGGGACGAGCACGAACTCTGTTAATACTAACTTTACAAATTACGGCGAGACTGCCATTGGTACGACTGATAATTTCACAAGTTATGGAAATATGATGAACGTTCCTGTAAATTACTTCAAGACCTATGGAGATGGTGGGAATGGAGCAATTGATAGCTTCTCTAATTACAGAAATGGAACCAATATCGGCGGCGATTCCTTCCAATCCTATGCTAAGAACTCCAACGCAACACAAGTTGATTTCACCAATTATGGGAAAGAAGTAAACAGGGGCACAGATACATTCAGTGGGTACGGCAAGAATGCTAAGGGACAAAAGGTCGGTTTCAAGGAATATTTTAGGGTCAATGTCAGCAACACCTTTGATTTCCTGGAATACTCCAAAAATGGTGTCTCCTTCGCCAAATACACTAATGGAAGCTCCATGGCGTCCAAGTCTGCCCATGGCAGTTTGGTAAACAAGTGGGTCGAGCCGGGTAAGTTCTTTCGTGAGTCCATGTTGAAGGAGGGGCTCGTGATGCCTATGCCAGATATACGTGATAAATTACCTGGAAGGTCATTTTTGCCTCGAtctattttgtcaaatttaccGTTCTCCACTTCCAAAATCTCTGAGCTGAAGCAAATTTTTAAAGTTGCGGATGATTCATCCATGGAGAAGATCCTAATGAACTCATTAAATGAGTGCGAGAGGGCGCCGAGCCGAGGTGAGACCAAGCGATGTGTGGGCTCGATCCAGGACATGATTGATTTTGTCACTTTGGTGCTGGGTCGTGACGTGACGGTTCGGACAACAGAAAATGTAAATGGGTCGAAGAAGAATGTGATGGTGGGTTCAATCAAACGTATCAATGGTGGTAAAGTCACGCAATCTGTCTCGTGCCACCAGAGCTTGTTTCCTTATCTTCTTTATTACTGTCACTCTGTACCAAAAGTTCGGGTATACGAAGCAGATCTATTACATCCAAATACAAAGGCTAGGATTAACCATGGTGTTGCTATTTGTCACTTGGACACTTCAGCTTGGAGTGCAACCCACGGAGCATTCTTAGCTCTCGGGTCAGGTCCAGGTCGTATTGAAGATGGTTCCTCCATCGCCACCACCGTTGGGAGCTCCGGCGATGCGGTGGCCGGAGAGAAAAACCCGTTCACCCCAAAGGCATTTCTGATTCGGTATTGGGACAAAAAGATAACCAACAAATTGCCAAAACCATCATTTCTCCTCTCTAAAGCTTACCCATTAACCGCTATCGAATCCGCAGCATTCACCAATCTCGCCACGAGCAACGCGCTCTCCACGCGCCTCCCTGAATTCTGCGCCTCCGCTCACCTCCTCTGTTTCCCAGATATAGGAGCCAGCTTAGAGAAACACGATAATAACGGGGTCAACTTCACAACTTATGGAGACAAAAACTTCACCAACTATGGAACCGGTGGTGGACCCGGCGGAGTAGAGTCCTTCAAGAACTATTCCAATGACATAGTGCAGGACGATTTCCGGCGATACAGCCGAGGATCCACCGACCACAAGGACAATTTCGTCACCTATGGCCCCCAACGCACCAATACCATTGTATTACAGAACTTCCGCACATACGGCGCCGGAGCCACCGGCGGCAGCGGCAACTTCAAGCAGTATTCCGAATCAGTCAATTCTGGCGAAGTCGGGTTCACTTCCTACTCCGACGACGCAAACCAGAGAAGCCAGTCGTTCTCCAAGTACAGCGAATTCGCAAATTTTGCGGAACAAGGCGTCACGATGAACGTGCCAACACATGGTTTCAAGAACTATGGAGATGGCGGGAATGCTTCCACCGATGAATTTACGAATTACAGAGTAGGATCCAATTTCGGCAGCGAAACCTTCCAATCTTATGCGAAGAACTCGGACGCCGCGAAAGCTGATTTCACGAATTACGGGAATGGCACATCAGGCGGAGATGAATTCATAGGGTACGGAAAGGGAGGGAAGGGGCAAAAGGTTGGGTTCAAGGGATATTTTGGCGTGAATTTGACCAATACGTTTGGCTTCAAGGAATACGCCAAAAACGGCGTCTCCTTTGCAAATTACAGTAACGAACCCTCCAAGTTGGCTGCTTCCAAGTCCGTTGTCAGTGGCAGTGTGGTAAATAAGTGGGTTGAGCCAGGTAAGTTCTTTCGTGAGTCGATGCTGAAAGAAGGGGTTGTAATGCCTATGCCtgatataagggataaaatgccAAAAAGGTCGTTTTTGCCCCGAgctattttgtcaaaattatcgTTCTCCACTTCTAAGATCTCTGAGTTGAAGCAAATTTTTAAAGTGACGGATGATTCATCCTTAGATAAGATTCTAATGAGCTCATTGAAGGAGTGCGAGAGGGCACCAAGCCGTGGAGAAACCAGACGGTGCGTGGGCTCAATAGAGGATATGATTGACTTTGCCACTTCAGTGTTGGGTCGTGACGTGACAGTTCGAACTACGGAGAACGTAAATGGGTCGAAGAAGAATGTGATGGTGGGTTCAATCAAACATATCAATGGTGGTAAAGTCACTAAGTCTGTCTCTTGCCACCAAAGCTTGTTCCCTTACCTTCTTTATTACTGTCACTCTGTACCAAAGGTTCGAGTATACGAAGCTGATCTATTGGATCCAAATACAATAGTTAAGATTAACTACGGTGTTGCTATTTGTCACTTAGACACATCGGCTTGGAGTGCAACCCACGAAGCTTTCGTGGCTCTCGGGTCGAGTCCAGGTCGAATCGAAGTTTGTCACTGGATATTCCAAAATGACATGACTTGGACTATTGTGGATTAG 6516 0.4675 MQKQYLSLSLPFLLFIILSFTAGFAVAIATGGISGDAVAGEKNPFSPKAFLIRYWDRKITNKLPKPSFLLSKASPLTAKESAAFTRLAASNALSTRLPEFCSSAHLLCFPDLGATLEKHSNNNAKFTSYHDKKFTNYGTGGRPGGEDSFKNYSNGYANDVQNGFRRYSRGSTDHRDNFQIYGPGGNIVGQSFKTYGAGANGSGGDFKQYGHSINIPEMNFTSYSDDADGRSQTFSSYTEDGNVGNQSFTSYGKNSDEASNAFSLYSTFSNLIRSNFTNYGENSNGEIDKFTSYSNDTNGLANNFNNYGSGGNGAINSFTNYRRFSNNVEDSFESYAKNSNATQIDFATYGKEVNTGRDSFTGYGKDAKGQKVGFKQYFSFNVTNTFDFKEYAKNGVSFKKYTNESSLLDASMASKSTSGRLANKWVEPGKFFRESMLKEGVVMPMPDIRDKMPLRSFLPRSILSRLPFSTSKISELKQIFKAADDSSMEKIIMNSLSECERAPSRGETKRCVGSIEDMIDFATSVLGRDVAVRTTENVNGSKKNVVVGSIKPINDGKVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPKTKAKINHGVAICHLDTSAWSATHGAFVSLGSGPGRIEVGFAIANTVGSSGDAVGGEKNPFSPKAFLIGRRQTFSSYTENANTGDQTFTSYGKNGKQASNDFTNYGTNTSSIEFGTNFTNYGETAIGAVDTFANYGNITNILQSNFINYADAGNGAIDSFINYSNGSQVDFTTYGREAIQGTDTFTGYGKDAKGQKVGFKEYFSVNVSNAFDFKEYSKNGVSFKKYTNESSLLDASMASQSASGSFANKWVEPVADDSFMDKTIMRSLSECERTPSRGETKRCVGSIEDMIDFATSVLGRDVTVRATENVNGSKENVMVGSIKRINSGKVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDSNTKTKINHGVAICHLDTSAWSATHGAFLALGSGPGRIEVGFAIATTVGSSRDVVAGEKNPFSPKAFLIRYWDKKITNKLPKPSFLLSKASPLTATQSAAFTKLASSNALSTRLPEFCSSAHLLCFPDLRSNLEKHNNDSNKFTSYQEYKDFKNYGTGGGPGGENSFKNYSNPDFGDMFNDFRRYSRGSTGHKDNFQSYANGGNDVGETFSTYGAGATAGAGDFKKYTDSINVNEVHFTSYSDDANGRSQTFTSYTENSNGGDQTFSGYGKNGEKNSNDFKKYGTSTNSVNTNFTNYGETAIGTTDNFTSYGNMMNVPVNYFKTYGDGGNGAIDSFSNYRNGTNIGGDSFQSYAKNSNATQVDFTNYGKEVNRGTDTFSGYGKNAKGQKVGFKEYFRVNVSNTFDFLEYSKNGVSFAKYTNGSSMASKSAHGSLVNKWVEPGKFFRESMLKEGLVMPMPDIRDKLPGRSFLPRSILSNLPFSTSKISELKQIFKVADDSSMEKILMNSLNECERAPSRGETKRCVGSIQDMIDFVTLVLGRDVTVRTTENVNGSKKNVMVGSIKRINGGKVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLHPNTKARINHGVAICHLDTSAWSATHGAFLALGSGPGRIEDGSSIATTVGSSGDAVAGEKNPFTPKAFLIRYWDKKITNKLPKPSFLLSKAYPLTAIESAAFTNLATSNALSTRLPEFCASAHLLCFPDIGASLEKHDNNGVNFTTYGDKNFTNYGTGGGPGGVESFKNYSNDIVQDDFRRYSRGSTDHKDNFVTYGPQRTNTIVLQNFRTYGAGATGGSGNFKQYSESVNSGEVGFTSYSDDANQRSQSFSKYSEFANFAEQGVTMNVPTHGFKNYGDGGNASTDEFTNYRVGSNFGSETFQSYAKNSDAAKADFTNYGNGTSGGDEFIGYGKGGKGQKVGFKGYFGVNLTNTFGFKEYAKNGVSFANYSNEPSKLAASKSVVSGSVVNKWVEPGKFFRESMLKEGVVMPMPDIRDKMPKRSFLPRAILSKLSFSTSKISELKQIFKVTDDSSLDKILMSSLKECERAPSRGETRRCVGSIEDMIDFATSVLGRDVTVRTTENVNGSKKNVMVGSIKHINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPNTIVKINYGVAICHLDTSAWSATHEAFVALGSSPGRIEVCHWIFQNDMTWTIVD 2171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1113 2171 ProSiteProfiles BURP domain profile. 431 650 IPR004873 -
Sto11g1113 2171 Pfam BURP domain 1956 2168 IPR004873 -
Sto11g1113 2171 Pfam BURP domain 846 995 IPR004873 -
Sto11g1113 2171 Pfam BURP domain 1399 1596 IPR004873 -
Sto11g1113 2171 Pfam BURP domain 431 631 IPR004873 -
Sto11g1113 2171 ProSiteProfiles BURP domain profile. 1399 1618 IPR004873 -
Sto11g1113 2171 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 1817 2171 - -
Sto11g1113 2171 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 1009 1598 - -
Sto11g1113 2171 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 15 634 - -
Sto11g1113 2171 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 1612 1820 - -
Sto11g1113 2171 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 847 995 - -
Sto11g1113 2171 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 661 845 - -
Sto11g1113 2171 SMART BURP_2 1954 2170 IPR004873 -
Sto11g1113 2171 SMART BURP_2 792 1014 IPR004873 -
Sto11g1113 2171 SMART BURP_2 1397 1606 IPR004873 -
Sto11g1113 2171 SMART BURP_2 429 643 IPR004873 -
Sto11g1113 2171 ProSiteProfiles BURP domain profile. 1956 2170 IPR004873 -
Sto11g1113 2171 ProSiteProfiles BURP domain profile. 803 1014 IPR004873 -
Sto11g1113 2171 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 1612 1820 - -
Sto11g1113 2171 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 847 995 - -
Sto11g1113 2171 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 661 845 - -
Sto11g1113 2171 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 1817 2171 - -
Sto11g1113 2171 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 1009 1598 - -
Sto11g1113 2171 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 15 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1113 Sto-Chr11 11176227 11190378 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1113 - - gmx:100776642 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1113 11 11176227 11190378 Sto11g1113 11 11176227 11190378 ECH