Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1109 ATGATTACTGAGCATAGAATGACTACTCCTGCTCATACAATCGATGAAATTTCTCTGGAAAGGAAATTGCTGAAGCACGTTCGTGATAATGTTCATGGCAATATCTTTCTGGAGCCGTTCCTATCCGAGATTTTGATGAACTACGATAACATAAGTTCATACGAAAAGAATTTGGAATTTGAGCCGTTCACGTCAATGTCAGGAAATCGTGTACCTGAAGGCAGACAGAGTTTAACTTACACGGTTTACCCTGGGGCGGTGCACTCTCGCTTTGAGCATTCGCTCGGGGTTTATTGGTTGGCTGGCAAAGCCGTTGATATCATTAAAAAATACCAAGGGACTGAGCTTGGTATTGAGCATTTTGATGTACAGACAGTGAAACTAGCTGGACTTCTGCATGATGTTGGCCATGGGCCATTCAGCCACATGTTTGAGCGTGGGTTCCTTCCACTGGTCCTTAATGGCTCCACATGGATTCATCCTATATTGATCATTAGTGTTAAAGCTTGCAGGTCTCATGAAGAAATGTCAGTCAAAATGATAGATTACATCGTTGATGAACACAATATAGAAATGGATCCTGAAGTCATCAAGAAAGTGAAGGAAATGATCACTGCCAGCCCTGAATATCCGTCACAAAGAGAAAATCAGTTCTTGTATGATATTGTTGCGAACGGTCGCAATGGAATTGATGTTGACAAGTTTGACTACATTGAACGTGATAATCGTGCTTGTGGCCTAGGATGCAACTTTCAGCCTGACAGCTTGATGGAGTCAATGCAAGTTGTGGGTGACGAAATATGTTATCGTGCCAAAGATTATCTGACAATTCACAAGTTATTTACGACCCGTGCTGACTTGCATCGGACAGTCTATACACATGCAAAAGTGAAGGCAATAGAGTTAATGGTTATAGATGCACTGGTTAAAGCAAATCCATATCTTGGATTAGCATCCTCAATTCACCAACCATCTGAGTTCTGGAAGGTAGACGACTCGATCATTAAAACAATTGAAACTTCCTCTCGAAAAGAGCTGAAGGAATCCAGAGACCTGATTCTTCGTATTCGCAGAAGGGATATATACCAGTTCTGCAATGAATTTTCTGTTCCGAAGGAAGAGCTTCAATACTTCAAAGACATCACACCCCAAGATATTGTTTGTTCCCAGGAAGCAAATGGCATCACTTTAAAAGAAGATGATGTCGTTGTGTCCAACGTTAAAATTGATTTGACACGTGGACGGCAGAACCCTCTCGAAAGTGTACTCAAGAATTTACTGAATCAGGACTACGACAATAATCAAGAAAAATTCTCTATCTCGGATCACTGCATCAGTCACTTGTTGCCAGCATTTTATGAAGACATGATAGTGAGGGTTTATAGTAAGAAGCCTGAACTGGTTGGAATCGTTTCAGCTGCCTTCGAGAATTTACAGCTCAAGAAATTCGGAAGGAAGGCACAAGTACATGATACTCCCGAGAAGAAGAAACGTCGAAGATAA 1503 0.4132 MITEHRMTTPAHTIDEISLERKLLKHVRDNVHGNIFLEPFLSEILMNYDNISSYEKNLEFEPFTSMSGNRVPEGRQSLTYTVYPGAVHSRFEHSLGVYWLAGKAVDIIKKYQGTELGIEHFDVQTVKLAGLLHDVGHGPFSHMFERGFLPLVLNGSTWIHPILIISVKACRSHEEMSVKMIDYIVDEHNIEMDPEVIKKVKEMITASPEYPSQRENQFLYDIVANGRNGIDVDKFDYIERDNRACGLGCNFQPDSLMESMQVVGDEICYRAKDYLTIHKLFTTRADLHRTVYTHAKVKAIELMVIDALVKANPYLGLASSIHQPSEFWKVDDSIIKTIETSSRKELKESRDLILRIRRRDIYQFCNEFSVPKEELQYFKDITPQDIVCSQEANGITLKEDDVVVSNVKIDLTRGRQNPLESVLKNLLNQDYDNNQEKFSISDHCISHLLPAFYEDMIVRVYSKKPELVGIVSAAFENLQLKKFGRKAQVHDTPEKKKRRR 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1109 500 SUPERFAMILY HD-domain/PDEase-like 78 488 - -
Sto11g1109 500 Pfam HD domain 90 241 IPR006674 -
Sto11g1109 500 Gene3D Hypothetical protein af1432 23 360 - -
Sto11g1109 500 Gene3D - 361 486 - -
Sto11g1109 500 CDD HDc 88 246 IPR003607 -
Sto11g1109 500 PANTHER DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE 7 500 - -
Sto11g1109 500 PANTHER METAL-DEPENDENT PHOSPHOHYDROLASE 7 500 - -
Sto11g1109 500 SMART hd_13 86 247 IPR003607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1109 Sto-Chr11 11151951 11156612 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1109 K22544 - gmx:100796869 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1109 11 11151951 11156612 Sto11g1109 11 11151951 11156612 ECH