Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1107 ATGGCATATTGGCAACATCATCATCTCCTACTTTCTGCTCTCTTAATCTTGTGCTTAGCCATTGGGGTTTCTTCACGCAACAAGCGTTACACAACTCCAAGTGTCACTCCTTTGACAAACTCTTTTCCTCGTGTGACATTTGATCGTGGATTTTCTAAGGCTTTTGGGGCCTCAAATATCCGAATCCTCAATAATGGGTCCATGGCCACTCTGGCTCTTGACAAAACATCAGGCTCTGGTTTGGTCTCTCAAGGCAGATACTACTATGGATTCTTCAGTGCTGCCATTAAGTTACCTGCTGGTCTTTCCTCTGGTGTTGTAGTAGCCTTCTATTTGTCTAATGCAGATAAGTTCCCTCACAATCATGATGAGATAGACATTGAACTTCTAGGGCATGACAAGAGAAATGATTGGGTTATTCAGACCAATGTGTATGCTAATGGAAGTGTGAGCACTGGAAGGGAAGAGAAGTTCTATCTCTGGTTTGACCCAACACAGCAGCATCATTACTACAGCATCCTGTGGAACAACTATCACACAGTGTTCTTAGTGGACAATATTCCAGTGAGGGAGTTCATGCACAGCAATGCATATGGTTCTATATACCCATCAAAACCAATGTCAGTATATGCCACAATATGGGATGGATCAGAATGGGCAACACATGGAGGAAAATATGGAGTCAATTACAAATACGCACCGTTTACTGTTTCTTTTACAGAAATGGAATTGAGTGGTTGCATGGTAGACACATCACTTTCTTCTAATTCATGTTCAAAGACTATCCCTTCAAGCTTAGATCCAGTGAATGGACCACAGTTCACTAAGCTATCACAGCAACAGATGGCAGCCATGGATTGGGCTAGAAGGAAACTCATGTTTTACTCTTACTGTAATGACAAACCCAGGTTCAAAGTCATGCCTACAGAATGCCACTGA 939 0.4228 MAYWQHHHLLLSALLILCLAIGVSSRNKRYTTPSVTPLTNSFPRVTFDRGFSKAFGASNIRILNNGSMATLALDKTSGSGLVSQGRYYYGFFSAAIKLPAGLSSGVVVAFYLSNADKFPHNHDEIDIELLGHDKRNDWVIQTNVYANGSVSTGREEKFYLWFDPTQQHHYYSILWNNYHTVFLVDNIPVREFMHSNAYGSIYPSKPMSVYATIWDGSEWATHGGKYGVNYKYAPFTVSFTEMELSGCMVDTSLSSNSCSKTIPSSLDPVNGPQFTKLSQQQMAAMDWARRKLMFYSYCNDKPRFKVMPTECH 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1107 312 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 33-RELATED 1 312 - -
Sto11g1107 312 PIRSF EndGlu_transf 8 312 IPR016455 GO:0010411|GO:0016762|GO:0042546
Sto11g1107 312 Gene3D - 31 311 - -
Sto11g1107 312 CDD GH16_XET 45 311 IPR016455 GO:0010411|GO:0016762|GO:0042546
Sto11g1107 312 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 1 312 IPR044791 GO:0004553
Sto11g1107 312 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 25 239 IPR000757 GO:0004553|GO:0005975
Sto11g1107 312 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 311 IPR013320 -
Sto11g1107 312 Pfam Glycosyl hydrolases family 16 52 231 IPR000757 GO:0004553|GO:0005975
Sto11g1107 312 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 275 311 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1107 Sto-Chr11 11135161 11136625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1107 12 312 Glycoside Hydrolase AT1G10550 63.279 1.61e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1107 K08235 - gmx:100778993 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1107 11 11135161 11136625 Sto11g1107 11 11135161 11136625 ECH