LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto11g1096	ATGGCTCGTGATCTTGCACCAGAGGTTGAGAGATTGATGCAATTTCGAGATCCTAATATTCGGAAGAAGGCAGCATTGTGCTCCATACGAATCATAAAGAAGGTTCCAGACTTGGcagaaaattttataaatccTGCTGCTGCCTTACTTAAGGAAAAACATCACGGAGTTTTGATCTCTGGGGTTCAGCTTTGTACAGAGCTGTGTAAAGTTTGCACAGAAGCTCTTGAATATTTCAGAAAGAAATGCACAGAGGGTTTGGTCAGAACGCTCAAGGATCTAGCAAACAGTCCTTATGCACCAGAGTATGACATTGCTGGCATCACAGATCCTTTTCTCCATATCAGATTGCTTAAGCTTCTGCGTGTGTTGGGTGAAGGTGATGCTGATGCTAGTGACTCCATGAATGACATACTTGCTCAGGTGGCTACAAAGACCGAGTCAAGTAAAGTTGCAGGGAATGCCATTTTATATGAGTGTGTTCAAACAATAATGAGCATTGAAGATAATGGCGGTTTACGTGTTCTTGCCGTCAATATTCTGGGAAGATTCTTGTCAAACCGTGATAACAATATCAGatatgtggctttaAACATGCTTATGAAGGCTGTGACAGCTGATGCTCAGGCAGTGCAGAGGCATCGAGCAACAATTCTGGAATGTGTAAAGGATGCAGATGCTTCAATTCGGAGAAGAGCCCTTGAACTTGTTTATGTTCTGGTGAATGAAAGTAATGTCAAACCCTTAACAAAAGAGCTAATAGATTACCTGGAAGTCAGTGATCAAGATTTCAAGGGCGACCTTACTGCCAAAATTTGTTCTATAGTTACAAAGTTTTCCCCAGAGAAGATATGGTACATTGATCAGATGCTCAAGGTTCTGTCTGAGGCTGGAAACTTTGTAAAAGATGAAACATGGCATGCCTTCATTGTTGTGATAAGCAATGCTTCTGAACTTCAAGGATATACGGTTAGGGCATTATACAGGGCAATTCAAATGTCAACTGAGCAGGAAAGTTTTGTTAGAGTTGCAGTGTGGTGCATCGGAGAATATGGTGATATGTTAGTCAATAATATTGGAATGCTTGACATAGAAGACCCAATAACAGTGACTGAGTCAGATGCTGTAGATGTTGTAGAAATTGCTATAAAACGCCATTCATCAGATCTTACCACAAAAGCAATGGCTTTGGTTGCTCTCTTGAAACTCTCTTCACGCTTCCCATCGTGTTCTGAGAGGATCAAGGATATAGTTGTTCAGTACAAAGGAAACCTTATGCTTGAATTGCAGCAAAGATCTTTAGAGTTTAATTCAATTATTGCGAAGCATCAAAATATCAGATCTGCACTTGTCGAAAGGATGCCAGTTTTGGATGAAGCAACTTTCATTGGTAGGAGAGCTGGGTCTTTGTCAGGCACAGCCTCAACTCCGGCAGGACCTTCAGTTAATCTTCCAAATGGAGTTGCCAAAGCTTCTGTGTCTCCTCTTGTAGATCTGCTTGATCTAAATTCGGATGATGCTCCTGCACCTAGCTCTTCTGGCGGTGATCTTCTGCAGGACCTGCTTGGTGTTGATTTGTCACCCGCATCACAACCGTCTGGTGCTGGTCAAGCTCCTAAAAGTGGCACAGATGTTCTTTTGGATCTTTTATCAATTGGGTCGCCATCTGCTCAAAGCACCTCATCTACAACAGACATCTTATCCACAAGTATGAATGGCAAAGCACCAGTTTCACCGTTGGATGATCTATCCTCTCTTTCACTTTCTGCAAGAGAAACTTCAAATGCTGGAGCTGCTCCTATGATGGATCTGTTGGATGGTTTTGCCCCCAACCCACCAAGAAATGAAAACAACGGACCTGATTATCCATCTATAACCGCATATGAGAGCAGCTCCTTGAGGATGAcattcaatttttcaaaacaaccAGAAAACCCTCAAACAACAATTATCCAGGCTACCTTTACAAATTTGTCTTCTAATGCATATACAGATTTTGTTTTCCAGGCGGCAGTTCCAAAGTTTCTTCAGTTGCACCTAGAACCGGCTAGCAGCAATACTCTCCCTGCTAGTGATAATGGGACCCTCTCCCAAAATTTGAGAGTTACTAATAGCCAGCATGGAAAGAAATCTCTTGTTATGCGCATAAGGATAGCCTACAAGTTAGATGGCAAGGATAAGCTGGAGGAaggacaaataaataattttcctCGTGGTTTATGA	2223	0.4107	MARDLAPEVERLMQFRDPNIRKKAALCSIRIIKKVPDLAENFINPAAALLKEKHHGVLISGVQLCTELCKVCTEALEYFRKKCTEGLVRTLKDLANSPYAPEYDIAGITDPFLHIRLLKLLRVLGEGDADASDSMNDILAQVATKTESSKVAGNAILYECVQTIMSIEDNGGLRVLAVNILGRFLSNRDNNIRYVALNMLMKAVTADAQAVQRHRATILECVKDADASIRRRALELVYVLVNESNVKPLTKELIDYLEVSDQDFKGDLTAKICSIVTKFSPEKIWYIDQMLKVLSEAGNFVKDETWHAFIVVISNASELQGYTVRALYRAIQMSTEQESFVRVAVWCIGEYGDMLVNNIGMLDIEDPITVTESDAVDVVEIAIKRHSSDLTTKAMALVALLKLSSRFPSCSERIKDIVVQYKGNLMLELQQRSLEFNSIIAKHQNIRSALVERMPVLDEATFIGRRAGSLSGTASTPAGPSVNLPNGVAKASVSPLVDLLDLNSDDAPAPSSSGGDLLQDLLGVDLSPASQPSGAGQAPKSGTDVLLDLLSIGSPSAQSTSSTTDILSTSMNGKAPVSPLDDLSSLSLSARETSNAGAAPMMDLLDGFAPNPPRNENNGPDYPSITAYESSSLRMTFNFSKQPENPQTTIIQATFTNLSSNAYTDFVFQAAVPKFLQLHLEPASSNTLPASDNGTLSQNLRVTNSQHGKKSLVMRIRIAYKLDGKDKLEEGQINNFPRGL	740

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto11g1096	740	Pfam	Adaptin N terminal region	1	442	IPR002553	GO:0006886\|GO:0016192\|GO:0030117
	Sto11g1096	740	SUPERFAMILY	ARM repeat	1	455	IPR016024	-
	Sto11g1096	740	Pfam	Adaptin C-terminal domain	623	737	IPR008152	GO:0006886\|GO:0016192
	Sto11g1096	740	MobiDBLite	consensus disorder prediction	554	581	-	-
	Sto11g1096	740	PIRSF	AP1_gamma	1	740	IPR017107	GO:0005794\|GO:0016192\|GO:0030121
	Sto11g1096	740	SUPERFAMILY	Clathrin adaptor appendage domain	596	739	IPR013041	-
	Sto11g1096	740	Gene3D	-	1	458	IPR011989	-
	Sto11g1096	740	Gene3D	-	611	738	-	-
	Sto11g1096	740	ProSiteProfiles	Gamma-adaptin ear (GAE) domain profile.	620	737	IPR008153	-
	Sto11g1096	740	PANTHER	AP-1 COMPLEX SUBUNIT GAMMA	1	739	-	-
	Sto11g1096	740	PANTHER	ADAPTIN, ALPHA/GAMMA/EPSILON	1	739	-	-
	Sto11g1096	740	MobiDBLite	consensus disorder prediction	554	575	-	-
	Sto11g1096	740	SMART	alpha_adaptinc2	617	737	IPR008152	GO:0006886\|GO:0016192

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto11g1096	Sto-Chr11	11032175	11042351	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto11g1096	K12391		-	gmx:100802164	1201.42

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto11g1096	11	11032175	11042351	Sto11g1096	11	11032175	11042351	ECH