Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1060 ATGCTTCCCTCCAGCTTATACGCCGTCGTTTTGCCGCTCTTCCTCTGTTCCCTCTTCCCGCCGTTTTGCCTCGGCATTCGCTCGTTCCCcaccactactactactaccagCCTCCCGCACGACGACGAGGCGCCGGACTACCGTAACGGCGTGGGCTGCCCTGTTTCCTCCAACAGAACCGACGTCGTATTACGCTGCGACCCCTCTCTCGTCCACATCGCCATGACTCTAGACTCCGGCTACCTACGTGGCTCCATCGCCGCCGTCCACTCCGTCCTCCGCCACTCCTCCTGCCCCGAAAACGTCTTCTTCCACTTCATCGCCGCCGAGTTCGACCCGACCACTCCCCGGGTCCTGACCCGGCTCGTCCGATCCACCTTCCCTTCCCTCAATTTCAAAGTCTACATCTTCCGCGAAGACACCGTCCTCGACCTCATCTCCTCCTCCATCCGCCAAGCCCTCGAGAACCCCCTCAACTACGCCCGCAACTACCTCGGCGACATCCTCGATCCCTGCGTCCGCCGCGTCATCTACCTCGACTCCGACCTCGTCGTCGTCGACGACATCCACAAGCTCTGGAACGTGACCCTCACCGGGTCACGGGTGATCGGAGCCCCGGAGTACTGCCACGCCAATTTCACCAAGTACTTCACCGACACCTTCTGGTCCGACCCGGTTCTCTCCCGGGTCTTCTCCCGGGTGCGGCCCTGTTATTTCAATACGGGCGTGATGGTGATGGATTTGGGCAAGTGGAGGGAGGGGAATTACAGGAAGAGGATTGAGAATTGGATGGAATtgcagaggaagaagaggatttATGAATTGGGTTCGCTTCCGCCGTTCTTGCTGGTTTTCGGAGGGAATGTGGAAGGGATTGATCATAGGTGGAACCAGCATGGGTTGGGTGGGGATAATGTGAATGGGATTTGTAGGTCGTTGCATCCAGGTCCTGTGAGTTTGTTGCATTGGAGTGGGAAGGGGAAGCCATGGGCGAGGCTTGATGCGAAGCAACCCTGTCCGTTGGATCGTCTTTGGGAGCCTTATGATCTGTTCAAGCCAGAACAGAGGACGAGGAAGCAGAATGATCATCCATGGGGGTTCTCCTCTTCTATATTGGTGGGATATAGTCATGATTTGTTGTGA 1143 0.5538 MLPSSLYAVVLPLFLCSLFPPFCLGIRSFPTTTTTTSLPHDDEAPDYRNGVGCPVSSNRTDVVLRCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPENVFFHFIAAEFDPTTPRVLTRLVRSTFPSLNFKVYIFREDTVLDLISSSIRQALENPLNYARNYLGDILDPCVRRVIYLDSDLVVVDDIHKLWNVTLTGSRVIGAPEYCHANFTKYFTDTFWSDPVLSRVFSRVRPCYFNTGVMVMDLGKWREGNYRKRIENWMELQRKKRIYELGSLPPFLLVFGGNVEGIDHRWNQHGLGGDNVNGICRSLHPGPVSLLHWSGKGKPWARLDAKQPCPLDRLWEPYDLFKPEQRTRKQNDHPWGFSSSILVGYSHDLL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1060 380 SUPERFAMILY Nucleotide-diphospho-sugar transferases 71 354 IPR029044 -
Sto11g1060 380 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 13 360 - -
Sto11g1060 380 Pfam Glycosyl transferase family 8 72 332 IPR002495 GO:0016757
Sto11g1060 380 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 13 360 - -
Sto11g1060 380 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 72 344 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1060 Sto-Chr11 10781382 10782554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1060 2 369 Glycosyltransferase AT1G70090 70.557 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1060 - - vra:106762685 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1060 11 10781382 10782554 Sto11g1060 11 10781382 10782554 ECH