Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1059 ATGGCTCTTTCTCGTCTAGCTTCTTCGTCTCGATCCAATCTTCTCAAACCTATCTCCCTCGCATTATCTCTCCGCCGTTCGATTTCATCTTCACCCGATGACTCCTCCACTCTCACCATCGAGACCTCCCTTCCGTTCACCGCCCACAATTGCGACACACCTTCTCGCTCCGTCGACACCTCCCCCAAGGAGCTCATGTCCTTCTTCCGCGACATGGCTCTCATGCGACGGATGGAGATTGCCGCTGATTCTCTCTACAAGTCTAAGCTCATCCGAGGCTTCTGTCACTTGTACGATGGCCAGGAAGCAGTCTGCATCGGCATGGAGGCTGCCATTACCAAGAAGGATTGCATAATAACATCTTACCGTGATCATTGTACCTTCCTAGGTCGTGGTGGAACCTTAGTTCAGGTCTTCGCTGAGCTCATGGGTCGTCAAGCTGGCTGCGCCAAAGGAAAGGGTGGTTCTATGCATTTCTATAAGAAAGACGCTGGGTTCTATGGCGGTCACGGTATCGTTGGGGCTCAGATACCACTGGGCTGTGGATTGGCTTTTGCTCAGAAATATTCTAAGGATGGGAATGTGACATTCGCGTTGTACGGTGATGGTGCGGCAAATCAGGGGCAATTGTTCGAGGCGTTAAACATAGCTGCGCTTTTGGATCTGCCTGCGATTTTGGTCTGCGAGAATAATCATTATGGGATGGGGACGGCAGAGTGGAGAGCTGCTAAGAGTCCTGCTTATTACAAGCGTGGGGATTATGTTGCTGGGTTGAAGGTAGATGGCATGGATGTTCTTGCTGTAAAGCAGGCATGCAAATTTGCAAAGGAGTATGCTTTGAAGAAAGGACCCATTATTCTTGAACTGGACACCTACAGGTACCATGGCCACTCCATGTCTGATCCTGGGAGCACATACCGCACACGTGATGAGGTTTCTGGCGTGAGACAGGAGCGTGATCCAATTGAGAGAGTAAGAAAGCTGTTATTGTCACATGACATTGCTGCTGAAAAGGAGCTAAAGgaCATTGAAAAGGAGGTCAGAAAAGAAGTTGATGAAGCCATTGCTACAGCAAAgGAAAGTCCGATGCCAGATCCTTCTGAActatttaccaatatatatgttaaaggtttaggggttGAGGCATGTGGGGTTGATAGGAAGGAAAATAAAGTTACCTTGCCGTGA 1188 0.4773 MALSRLASSSRSNLLKPISLALSLRRSISSSPDDSSTLTIETSLPFTAHNCDTPSRSVDTSPKELMSFFRDMALMRRMEIAADSLYKSKLIRGFCHLYDGQEAVCIGMEAAITKKDCIITSYRDHCTFLGRGGTLVQVFAELMGRQAGCAKGKGGSMHFYKKDAGFYGGHGIVGAQIPLGCGLAFAQKYSKDGNVTFALYGDGAANQGQLFEALNIAALLDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVAGLKVDGMDVLAVKQACKFAKEYALKKGPIILELDTYRYHGHSMSDPGSTYRTRDEVSGVRQERDPIERVRKLLLSHDIAAEKELKDIEKEVRKEVDEAIATAKESPMPDPSELFTNIYVKGLGVEACGVDRKENKVTLP 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1059 395 CDD TPP_E1_PDC_ADC_BCADC 68 358 - -
Sto11g1059 395 Pfam Dehydrogenase E1 component 71 366 IPR001017 GO:0016624
Sto11g1059 395 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 8 395 - -
Sto11g1059 395 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 8 395 - -
Sto11g1059 395 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 55 376 IPR029061 -
Sto11g1059 395 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 63 375 IPR017597 GO:0004739|GO:0006086|GO:0043231
Sto11g1059 395 Gene3D - 24 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1059 Sto-Chr11 10768782 10772732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1059 1 395 Acyl Lipid Metabolism Gene Families AT1G24180 80.653 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1059 K00161 - csv:101205918 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1059 11 10768782 10772732 Sto11g1059 11 10768782 10772732 ECH