Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1058 ATGAACACTCATGTTATCCTCTCACCGCCCcaccctttccctttccctctgcTTGCTTTCCTAACTCCATCTTCCAACACCTCTCTTTCTCATCCTCTGATTCGCCGCCAATCTCTCTGCTTCTCCCTCGCatcttccttctccttcctcAAGTTCCGTGCCTCATTCAAGTCCCCTAACTCCTTCTTCCATTCCCAGTCTCAGCTCTCCGACGCCGAGCAGGAGGAAGACGACTACGAAGAAGAAGACGAGGACGACGATGGTGATGACGTGGCCGCCGATGATTACGACGACGTCTCCGGCGATGTTTCCGATGGCGTCGTCTATGGTGATGACGAGAATGATGCGTTTCAGGCCGAGACGATTCGGCACGAAGGATTCAAGTGGCAGAGAGTCGAGAAGCTTTGCAATGAAGTTAGAGAGTTTGGCGAGGAAATTATTGATGTGGACGAGCTCGCTTCGGTTTATGATTTCCGGATCGATAAGTTCCAGCGGCTGGCAATACAAGCATTTTTAAGAGGCTCATCAGTTGTGGTTTCTGCGCCAACAAGCAGCGGGAAGACATTAATTGCGGAAGCTGCAGGAGTAGCAACAGTAGCTAGAGGAAGGCGCATATTCTATACCACTCCACTCAAGGCATTGTCCAATCAGAAGTTTCGCGAATTCCGGGAGACTTTTGGCGACAGCTATGTTGGCCTTCTTACTGGTGATTCTGCAGTCAACAAGGATGCTCAGGTTTTGGTAATGACTACAGAGATATTACGCAACATGTTGTATCAGAGCGTTGGTAATGTTTCTTCTGGAGGTGGACTTTTCCATGTCGACGTGATTGTATTGGATGAGGTTCATTACCTTAGTGACATATCTCGTGGTACAGTTTGGGAAGAGATTGTTATTTATTGTCCCAAAGAAGTTCAACTTATTTGTCTGTCAGCAACTGTTGCAAATCCTGATGAGCTGGCTGGTTGGATTGGTCAGATTCATGGTAGAACAGAGTTAGTAACGTCATCAAAACGGCCAGTTCCATTGACTTGGCATTTCTCCACAAAGACATCATTATTACCACTATTAGATGAGAAAGGAACACGTATGAATAGGAAGCTCTCACTTAATTATTTACAGCTTCAAGCTTCAGGAGTTAAATCTTACAAGGATGATTGGGGTAGAAGAAGAAATTCTAGAAAACGTGGAACTCAGACAAGCCATGATGATGATGGTAGCAATAGCATGTCTGAACAACGATCTCTTTCGAAGAATGACATAAATGCAATTCGTCGTTTGCAAGTTCCTCAAGTTGTAGATACATTATGGCACCTCCAGTCAAGAAATATGCTCCCTGCTATTTGGTTCATTTTTAGCAGGAAGGGTTGTGATGCGGCTGTGCAATACCTTGAAGACTGCAAACTCTTAGATGAGTGTGAGACTAGCGAAGTTGAACTAGCCTTGAAGAGATTTCGCATTCAGTATCCTGATGCTGTAAGAGAAACAGCTGTAAAAGGACTTCTACAAGGGGTTGCTGCACATCATGCTGGTTGTCTCCCTTTGTGGAAGGCATTCATAGAAGAGTTATTTCAGAAGGGCCTCGTCAAAGTTGTTTTTGCTACGGAAACTCTTGCTGCTGGAATTAATATGCCAGCTAGAACAGCTGTTATTTCATCCCTCAGTAAAAGGAGTGATAGTGGACGTATTCAGTTAAGTTCAAATGAATTGCTTCAAATGGCAGGGCGTGCTGGGCGCAGAGGGACTGATAAAAGTGGTCATGTAGTTCTTGTCCAAACTCCTTATGAAGGTGCTGAAGAGTGCTGCAAGATTCTATTTTCTGGACTTGAGCCCCTTGTGTCACAGTTTACTGCATCATATGGAATGGTTTTGAATCTCCTTTCTGGTGTAAAAGCCATTCATAGGTCAAACGAATCAGATGAAATGAGATCTTCCACATCAGGGAGAACTTTGGAAGAAGCTAGGAAACTAGTTGAACAGAGTTTTGGAAATTATGTTAGTAGCAATGTTATGCTGGCTGCTAAAGAAGAACTTAGTAAAATTgagaaagaaattgaattgTTGACATCAGAGATCACTGATGAGGCCATAGATAGAAGAAGTAGGAAGTCTTTATCACAGGCAGATTATAAGGAGATTGCAGAATTACAAGAAGAATTAAGGGCAGAAAAACGTGTTCGAAGTGAACTGCGAAAGCAGATGGATGCAAAGAGAATTTCTTCCCTGAAACCTTTATTGGAAGAGTCTGCAAGTGGAGATCTACCATTTTTGTGCTTGCAGTATAAAGATTCTGAAGGAGTCCAACATTCAGTTCCTGCTGTATTTTTGGGGAAGGTTGACTCTCTTAATGCTTCAAAGCTTAGGAACATGGTTTCTTCTGATGATTTATTTGCGTTAAATCTAGTAGATACTGATTCTGAACTCAACAAGGACATTGAACCATCATATCATGTGGCTCTTGGTTCAGATAACTCTTGGTATTTATTTACAGAAAGGTGGATTAAAGCAGTATATAAGACAGGTTTTCCTAACGTCGCATTAGCTCAAGGGGATGCCTTGCCACGAGAAATTATGAGTACGCTCCTTGATAAAGAGGAGATGAAATGGGATAAGCTTTCTCACTCCGAACTTGGTGGTTTGTGGTTCATGGAAGGATCTCTAGAGACATGGTCTTGGAGTTTAAATGTTCCTGTTTTGAGTAGTTTTTCTGAAGATGACGAGCTTCTACAAAATTCTCAACCCTACAAAGATGCTACAGAACAGTACAAGGAACAAAGAAATAAAGTTTCACGCTTGAAGAAAAAGATAGCACGAACTAATGGCTTTAAAGAGTATAAGAAAATCTTAGACTTTGCCAATTTTACCCAGGACAAGATTAAACGCTTAAAAACTAGATCGAAGCGTTTGATTAATCGGATAGAACAAATTGAACCCTCAGGGTGGAAGGAGTTTATGCAGGTTAGCAATGTCATACACGAAACCAGGGCTTTAGATATCAATACACACATCATATTTCCGCTTGGTGAGACCGCTGCCGCAATTCGAGGAGAGAATGAACTGTGGCTTGCAATGGTCCTTCGCAATAAAATCTTGTTAGAACTAAAGCCTGCAGAACTTGCTGCAGTGATTGCAAGTTTGGTTTCTGAGGGTATCAAACTCCGTCCTTGGAAAAACAACAGCTATATATATGAGCCTTCTTCAACTGTCATTAATACCATAAGTTTCTTTGATGAGCAAAGAAGCTCCCTTTTGCAGATTCAGGAGAAACATGGGGTAACAATACCTTGCAGTATAGATAGCCAATTTTCTGGTATGGTTGAAGCTTGGGCTTCTGGGTTGACATGGAGAGAAATAATGATGGATTGTGCAATGGATGAAGGTGATTTAGCTCGCCTCTTACGACGGACCATTGATCTTTTGGCTCAGATACCTAAGTTGCCAGATATTGATCGGTTGTTGCAGCGCAATGCAAAAGCTGCAGCCGATGTCATGGACCGGCCTCCAATAAGTGAACTCGCTGGTTAG 3525 0.4184 MNTHVILSPPHPFPFPLLAFLTPSSNTSLSHPLIRRQSLCFSLASSFSFLKFRASFKSPNSFFHSQSQLSDAEQEEDDYEEEDEDDDGDDVAADDYDDVSGDVSDGVVYGDDENDAFQAETIRHEGFKWQRVEKLCNEVREFGEEIIDVDELASVYDFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAGVATVARGRRIFYTTPLKALSNQKFREFRETFGDSYVGLLTGDSAVNKDAQVLVMTTEILRNMLYQSVGNVSSGGGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGRTELVTSSKRPVPLTWHFSTKTSLLPLLDEKGTRMNRKLSLNYLQLQASGVKSYKDDWGRRRNSRKRGTQTSHDDDGSNSMSEQRSLSKNDINAIRRLQVPQVVDTLWHLQSRNMLPAIWFIFSRKGCDAAVQYLEDCKLLDECETSEVELALKRFRIQYPDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQKGLVKVVFATETLAAGINMPARTAVISSLSKRSDSGRIQLSSNELLQMAGRAGRRGTDKSGHVVLVQTPYEGAEECCKILFSGLEPLVSQFTASYGMVLNLLSGVKAIHRSNESDEMRSSTSGRTLEEARKLVEQSFGNYVSSNVMLAAKEELSKIEKEIELLTSEITDEAIDRRSRKSLSQADYKEIAELQEELRAEKRVRSELRKQMDAKRISSLKPLLEESASGDLPFLCLQYKDSEGVQHSVPAVFLGKVDSLNASKLRNMVSSDDLFALNLVDTDSELNKDIEPSYHVALGSDNSWYLFTERWIKAVYKTGFPNVALAQGDALPREIMSTLLDKEEMKWDKLSHSELGGLWFMEGSLETWSWSLNVPVLSSFSEDDELLQNSQPYKDATEQYKEQRNKVSRLKKKIARTNGFKEYKKILDFANFTQDKIKRLKTRSKRLINRIEQIEPSGWKEFMQVSNVIHETRALDINTHIIFPLGETAAAIRGENELWLAMVLRNKILLELKPAELAAVIASLVSEGIKLRPWKNNSYIYEPSSTVINTISFFDEQRSSLLQIQEKHGVTIPCSIDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDRLLQRNAKAAADVMDRPPISELAG 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1058 1174 Pfam DSHCT (NUC185) domain 1004 1169 IPR012961 -
Sto11g1058 1174 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 168 332 IPR014001 -
Sto11g1058 1174 Coils Coil 713 733 - -
Sto11g1058 1174 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 428 627 IPR001650 -
Sto11g1058 1174 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC 45 1170 - -
Sto11g1058 1174 MobiDBLite consensus disorder prediction 72 101 - -
Sto11g1058 1174 MobiDBLite consensus disorder prediction 384 402 - -
Sto11g1058 1174 Gene3D - 119 339 IPR027417 -
Sto11g1058 1174 SMART ultradead3 156 346 IPR014001 -
Sto11g1058 1174 CDD SF2_C_Ski2 425 593 - -
Sto11g1058 1174 Coils Coil 915 935 - -
Sto11g1058 1174 SMART DSHCT_2 999 1173 IPR012961 -
Sto11g1058 1174 MobiDBLite consensus disorder prediction 63 101 - -
Sto11g1058 1174 MobiDBLite consensus disorder prediction 384 415 - -
Sto11g1058 1174 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 45 1170 - -
Sto11g1058 1174 Coils Coil 952 972 - -
Sto11g1058 1174 SMART helicmild6 495 581 IPR001650 -
Sto11g1058 1174 Coils Coil 671 691 - -
Sto11g1058 1174 Pfam DEAD/DEAH box helicase 163 315 IPR011545 GO:0003676|GO:0005524
Sto11g1058 1174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 594 IPR027417 -
Sto11g1058 1174 Gene3D - 956 1166 - -
Sto11g1058 1174 Gene3D - 340 612 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1058 Sto-Chr11 10760233 10767184 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1058 K26077 - qsu:112008576 1747.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1058 11 10760233 10767184 Sto11g1058 11 10760233 10767184 ECH