Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1024 ATGGAAGGAGGTGTCAAGTTGGACGGATGGGGATACGAGGTGAAAACCTCCTCTGACGCTTGCATTTCGGCCATCAACGCCTACTATCATCAGGTACTCAGCTATGGCAGAGAGAGGTCTGTGATTCTGAAAGCTCCAGACCATGACGAAGCCTGCGTGTTGGCTAACATCTTGGCAGCTCATTACCTTTACCACTCCGATCCTTCACGAGCTACCTCTTTTCTTGAAGCTGCTAAGTCCCACCTTGAACAAGCTACCCTGTACGAGAGACTAGTTTATGATGCCCTCAGTTATTTGGTATCTGAAGACAGAGATGATGATGTCGCTTTTGAATTGCATCGAAAGCTTCTGAAAGAGTTCCCAAGAGACCTGTCATCTCTGAAGAGAGCACAAATCCTGTGCTTCTACATGGGTCGACCTGATCTTTCTTTATCTCTTGTTCATCAGGTTCTGCCTGAAAATGAAGGAGAAAATTACATATATGGCATGCTTGCTTTTCCTTTATTGGAGCTTGGACAAATGAGAGATGCCGAGGAAGCTTCCAGAAGAGGATTTGAAATCAATAAGGAAGATGTCTGGGCGCAACATGCTTTATGCCATGTTTTTCAGTATGAGTGCTGTTTCAAAGAAGCTGTTCAGTTCATGGAAGGATGTTCCTCTTCGTGGAATTCTTGTTGTCCATTTATGCTGACCCACAATTGGTGGCATGTCGCACTTTGCTATTTAGAAGGTAATGCTCCAAAGCAAAGAGTCCTTGAGATATATGACCATCATATATGGAATAAATTAGACAACACTGATGCTGTAAGCGGCGTAGAGGTTTACTTAAATGCTGTTGGTCTGCTTTTGCGATTGTATGTTCGTGGTGAAATTGACATCCTTGGCGATCGTCTTAAGATACTAGCAAGATGCCTAAGTGATCAAGCAAACTGGTATTCAGAGTGGCACCTTGACGTAATGACAGTTTGGGCTTTGGCAAAGACTGGAGAATTCTCTAGAGCAGAAGATCTTCTGAATGGCTTAAAATACAGGATTTCTAGGATGGCCAAAAAGAAACAACAATTAATGCAGAGAGGAATGCTGCTTGCAGAAGCCCTTTATGCATATGGGAGTGGTAACGACAGGCAAGGACTTGAATTACTTGGTCCAGATTTTGATGCCAATAATTGCAAGATGATTGGAGCGTCAGATGAACAGCTCGATGTGTTCAATGAAGTTTGGTACACGATGTTGCTGAATGCTGGAGAAGCGATGAAGGCGATTGAAGTAATTGAGAAGCGAATCAAGAAGAGGGAAGGGGTCCCATTCTTATGGCGTCTGCTGGAGAGAGGATACAAACTAGCAAACAAGCCAGAAGCTGGAATTGCAAACGAAAAGGCGAGGGCCTTGGAGAGTGCATATTTCTAA 1407 0.4385 MEGGVKLDGWGYEVKTSSDACISAINAYYHQVLSYGRERSVILKAPDHDEACVLANILAAHYLYHSDPSRATSFLEAAKSHLEQATLYERLVYDALSYLVSEDRDDDVAFELHRKLLKEFPRDLSSLKRAQILCFYMGRPDLSLSLVHQVLPENEGENYIYGMLAFPLLELGQMRDAEEASRRGFEINKEDVWAQHALCHVFQYECCFKEAVQFMEGCSSSWNSCCPFMLTHNWWHVALCYLEGNAPKQRVLEIYDHHIWNKLDNTDAVSGVEVYLNAVGLLLRLYVRGEIDILGDRLKILARCLSDQANWYSEWHLDVMTVWALAKTGEFSRAEDLLNGLKYRISRMAKKKQQLMQRGMLLAEALYAYGSGNDRQGLELLGPDFDANNCKMIGASDEQLDVFNEVWYTMLLNAGEAMKAIEVIEKRIKKREGVPFLWRLLERGYKLANKPEAGIANEKARALESAYF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1024 468 Gene3D Tetratricopeptide repeat domain 27 218 IPR011990 GO:0005515
Sto11g1024 468 CDD StaR_like 52 408 IPR033891 -
Sto11g1024 468 SUPERFAMILY TPR-like 44 226 IPR011990 GO:0005515
Sto11g1024 468 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 38 6 467 IPR033891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1024 Sto-Chr11 10526241 10530606 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1024 - - lja:Lj2g3v1349460.1 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1024 11 10526241 10530606 Sto11g1024 11 10526241 10530606 ECH