Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0977 CTGCTTCAGTTCTGCGAAGTCAAAGAAGAGTCTCTAGCTTATTCTGCAATACTCCTCTCCATTCTTCCTCATCGCTTTCAGCTTTCAGAGGCAGTGATAGTAATGGTGATTGGTAATGGAGTCGGAGGACCACTGGTTGCATTGAGGAGGTCAGGAACTCAGGGTGATGGCTTAAAGTTATTGACACCAGCTATGTGGTTTGGGTCAAAATTTGGTGGGCAATCAGCTTGGAAACATATTGTAAACATGACTTCTAGTGGTTATACTGTTGAAGTTACATGTCTATCACCAAAAGCCACAGAAAAGGATGTCTATGATTTTTTTGCTTTCTCTGGTGTAATTGAGCATATTGATATTGTCAGGTCTGGTGATGATGCCTGTACTGCTTATGTGACATTCAAAGATGCATATTCTCAAGAAACCGCTTGCTTGCTCAGTGGTGCCTCTATTTTAGATCAACGTGTATGCATAACACGCTGGGGTGAGGGTGCAGATGAGTCTGGCTTTTGGAATAGGACTTCTTATGGACATGAGGAAGAATTTGCTTCAACGCAACATCAAAGCAGTCAATTTGTGTCCTCTGCTGGAGAAGCAGTTACTGTGGCTCAAGAAGTTGTCAAGAGCATGCTAGCAAAGGGATATGTTCTTGGTAAGGATGCGTTAGCCAATGCCAAAGCATTTGACGAGTCTCATGGGGTTTCAGCAACCGCATCAGCAAAGGTTGCTGAGCTGAACCAGAGAATTGGCTTGACTGAGAAATTATCTGCCGGGGTTGAAGCGGTTAGATCGGTGAATCAGAAATATCATGTCTCAGAAACAGCCAAGTCTGCTGCATCAGCGACAGGAAGATCAGTTGCAGCAGCTGCAAATACTGTGGTAAATAGTAGCTATTTTTCAAAGGGAGCTTTGTGGATGTCAGGTGTTTTGTCCAGGGCAGCAGAAGCTGCAGCTGATTTGGGTAGCCGAGGTGGTAGTAGGCAGTGA 984 0.4461 LLQFCEVKEESLAYSAILLSILPHRFQLSEAVIVMVIGNGVGGPLVALRRSGTQGDGLKLLTPAMWFGSKFGGQSAWKHIVNMTSSGYTVEVTCLSPKATEKDVYDFFAFSGVIEHIDIVRSGDDACTAYVTFKDAYSQETACLLSGASILDQRVCITRWGEGADESGFWNRTSYGHEEEFASTQHQSSQFVSSAGEAVTVAQEVVKSMLAKGYVLGKDALANAKAFDESHGVSATASAKVAELNQRIGLTEKLSAGVEAVRSVNQKYHVSETAKSAASATGRSVAAAANTVVNSSYFSKGALWMSGVLSRAAEAAADLGSRGGSRQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0977 327 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 83 324 - -
Sto11g0977 327 SUPERFAMILY RNA-binding domain, RBD 86 163 IPR035979 GO:0003676
Sto11g0977 327 SMART rrm1_1 89 159 IPR000504 GO:0003723
Sto11g0977 327 Gene3D - 78 168 IPR012677 -
Sto11g0977 327 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 92 150 IPR000504 GO:0003723
Sto11g0977 327 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 83 324 - -
Sto11g0977 327 CDD RRM_Vip1_like 90 158 IPR034360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0977 Sto-Chr11 10138392 10141416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0977 - - gmx:100805907 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0977 11 10138392 10141416 Sto11g0977 11 10138392 10141416 ECH