Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0637 ATGGGAAGCACCAGTATTGCTGCTGCTGCTACCAATATCCTTCCCCAGTTGGAGCTCCGAAATTACTGTTTCAGAAGAATCGGGTCGACCCACACCCACCTCACTTCTCTACGCCTCCAAAGCTCCTCCACTCCGACCTCCAGCATCGGTGTCTTACGGAGCCATGGGAGTTTCGGAAGACTTGTTTGCTTTGCCGTAGATGACGATTTGAGAGCCAACCGCCAAGAATTGGGTGGGGGTACTGGCGGAACAGGGGTTGGCTCCGCCGTTGAGGATAAGCCCGGAAATGCAGATTTTCTTGAAGGTGAAAGAGAAGAATCACTGGAAAATTCTCAGCAAGATGGTGGGGGGAGCGCACTCTATGATTTTCTTTATCCTAGTAAAGAGCTCCTTCCTGATGATAAAGAAATGAGCATATTTGATCATCTTGAAGAGCTGCGACAGAGAATTTTTGTGTCAGTTCTAGCAGTGGGAGCTGCCATTTTAGGATGCTTTGCTTTTTCAAAAGAACTAATAATGATTCTTGAAGCTCCTGTTAAAACACAGGGTGTAAGATTTCTTCAGCTTGCTCCTGGAGAGTTTTTCTTTACAACTATAAAGGTGTCTGGATACTGTGGCCTCCTCTTGGGAAGTCCTGTAATTCTGTATGAGATCATAGCCTTTATACTTCCAGGATTAACAAGAGATGAAAGGAGGTTTCTAGGGCCAATTGTGTTGGGTTCATCAGTTCTTTTCTATGCTGGAATAACATTCTCCTATCTAGTTCTCACTCCTGCAGCATTAAATTTCTTTGTTACTTACGCTGAAGGGGTTGTTGAGTCATTATGGTCAATTGATCAATACTTTGAGTTTGTGCTAGTGCTTATGTTCAGTACAGGCTTGTCTTTCCAGgtACCTGTGATACAGTTTCTTCTGGGTCAAGTAGGGTTGGTTTCTGGAGACCAAATGCTATCAATTTGGAGATATGTAGTGGTGGGTGCAGTAGTGGCGGCTGCTATAGTCACACCATCCACTGATCCTCTCACACAGGTTCTTCTTGCAGCACCTCTCTTGGGTCTTTATATAGGCGATTCTGCTGGATCATCATCAGGTGATGAAGCTTGCTTGAGTTCTTTCATCTCACGAAGAACATCCTTGATTGAAACCATAACCTGTGTCATTCCTCTGCCAATTGCTGCAATATTTGTTTTAGGAGCCTTTTCAAGAGAAGAACATGCTTCCCACACAGCACCAACTAATTGA 1242 0.4436 MGSTSIAAAATNILPQLELRNYCFRRIGSTHTHLTSLRLQSSSTPTSSIGVLRSHGSFGRLVCFAVDDDLRANRQELGGGTGGTGVGSAVEDKPGNADFLEGEREESLENSQQDGGGSALYDFLYPSKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIMILEAPVKTQGVRFLQLAPGEFFFTTIKVSGYCGLLLGSPVILYEIIAFILPGLTRDERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQVGLVSGDQMLSIWRYVVVGAVVAAAIVTPSTDPLTQVLLAAPLLGLYIGDSAGSSSGDEACLSSFISRRTSLIETITCVIPLPIAAIFVLGAFSREEHASHTAPTN 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0637 413 MobiDBLite consensus disorder prediction 75 115 - -
Sto11g0637 413 Hamap Sec-independent protein translocase protein TatC [tatC]. 134 366 IPR002033 GO:0016021
Sto11g0637 413 PANTHER SEC-INDEPENDENT PERIPLASMIC PROTEIN TRANSLOCASE TATC-RELATED 38 357 - -
Sto11g0637 413 ProSitePatterns TatC family signature. 281 300 IPR019820 -
Sto11g0637 413 MobiDBLite consensus disorder prediction 96 110 - -
Sto11g0637 413 PRINTS Bacterial Sec-independent translocation TatC protein family signature 138 165 IPR002033 GO:0016021
Sto11g0637 413 PRINTS Bacterial Sec-independent translocation TatC protein family signature 212 230 IPR002033 GO:0016021
Sto11g0637 413 PRINTS Bacterial Sec-independent translocation TatC protein family signature 230 256 IPR002033 GO:0016021
Sto11g0637 413 PRINTS Bacterial Sec-independent translocation TatC protein family signature 281 309 IPR002033 GO:0016021
Sto11g0637 413 Pfam Sec-independent protein translocase protein (TatC) 141 349 IPR002033 GO:0016021
Sto11g0637 413 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 38 357 IPR002033 GO:0016021
Sto11g0637 413 TIGRFAM tatC: twin arginine-targeting protein translocase TatC 139 354 IPR002033 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0637 Sto-Chr11 7471844 7477363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0637 K03118 - qsu:112004665 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0637 11 7471844 7477363 Sto11g0637 11 7471844 7477363 ECH