Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0452 ttggcggTGTATGCAGTCCCCAGGAGTTTTAGATTACTGGAAGAGCTTGAGAGAGGGGAGAAGGGAATCGGTGATGGAACTGTCAGCTATGGCATGGATGATGCTGATGATATATACATGCAGTCATGGACAGGGACTATTATTGGCCCCCCTGGTACTGTTCATGAAGGACGTATCTACCAGTTGAAATTGTTCTGTGGCAAGGATTATCCAGACAATCCACCATCTGTAAGATTCCAAACAAGGATTAACATGACTTGTGTCAACCAAGAATCTGGAGTGGTTGACCCACATTTATTTTCTATGCTTGCTAATTGGCAACGAGAGTATACAATGGAAGACATTCTGATGCAATTGAAGAAAGAAATGTCGTCTCCTCAAAATCGGAAGCTAGCTCAGCCTCCTGAAGGCAACGAAGATGGCAGGATTGATCAGAAAGGGTTGGTGCTGAGATGTTGTATTGTGTAA 468 0.4295 LAVYAVPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQESGVVDPHLFSMLANWQREYTMEDILMQLKKEMSSPQNRKLAQPPEGNEDGRIDQKGLVLRCCIV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0452 155 MobiDBLite consensus disorder prediction 123 142 - -
Sto11g0452 155 Gene3D Ubiquitin Conjugating Enzyme 2 140 IPR016135 -
Sto11g0452 155 SUPERFAMILY UBC-like 5 138 IPR016135 -
Sto11g0452 155 Pfam Ubiquitin-conjugating enzyme 37 132 IPR000608 -
Sto11g0452 155 SMART ubc_7 10 154 - -
Sto11g0452 155 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 7 155 IPR000608 -
Sto11g0452 155 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 140 - -
Sto11g0452 155 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 6 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0452 Sto-Chr11 5716392 5718660 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0452 K10704 - gmx:100527089 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0452 11 5716392 5718660 Sto11g0452 11 5716392 5718660 ECH