Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2611 ATGTCTCGAATATTCTCGAGATGGAAGAAGCTGAGGGAAATAGCGATGATTTCTTCTACTTCTTGTTATGCGGAGACCCATTTCGCTGTTCAATCTCGAATCAATTTCCGATTCAATCAGGTCCGCCCAATCTCGACGCACTTGAATTATTTTCACATTGCCACACTTAGACGCCGGGAATCATTCATCGGTGTTCAGGAGCGGTACAAGTGGGACCATGGTGGCTCCGGCGATACTCATAATCGGAATTCTCCGGCACGGAAGATTCGAGCGGAGGCTAATTGCCCGCGGTGTGCCAAGCAAATGGATGTGTTTTTCTCCAATCGCTATTTTCCCACTTCTGCTTCTGATTCCAATTTGATCCCTCCGATTTCTATTTATGAAGAAGGAGGTTATCAGACTATGAATCTCTGCCCTAATTGTAAAACTGCTTATTACTTCCGCCCTTATAACACTGCTCCTTTACAAGGTTCATTCGTGGAGATTGGTAGGGTCACAAATAATGATGTTAATAATACTGTTAGCAAATTGCAGAGGAGGATGTCCCATGGCAAAGTCAAAGATGACAGAGAAAGTAATAATGGCCATGGTAGTGACAGTGGAGTAGAAGATTATGGCCATAGAAGTTATAGAAGTAATGGGCCTAGAGTGCCATTCTGGGACACTTTAAGATCTTATAGTGATGGAGATGGTGGAGAGCCACCAGAAACCTGGTCTCCCCCACCTGGTTCTTCTAATGGGAATGGGCTGGCTGTGCATACTCCTCCTGGCCCGCCTTTTGCGCCCGGGGTTAATGTTGTTCGGGCTTCAGGGCCACGCGAAGGTGGTTCAGGTGGTGGAGGTGGGGGTAATGGAGAGAAGACTGCCTGGGGAGGCTCAAATTTGGGTAAGGATTTACCAACACCAAAGGAGATCTGCAAGGGTCTTGATAAATTTGTTATTGGCCAGAGCAGAGCCAAAAAGGTGCTTTCTGTAGCTGTTTATAACCACTATAAAAGAATACACCATGCCTCTTTACAGAAAGGGTCAGGGGCAGAGTCAGGAATTTCAAAAGCTCTAGATGATGACGATAACGTGGAGCTAGAAAAGAGTAATGTTCTCTTAATGGGTCCAACAGGGTCAGGGAAGACATTGCTTGCAAAAACTCTAGCTCGATTTGTGAATGTTCCATTTGTCATTGCTGATGCAACTACCTTAACACAGGCAAGTATTCTATCGTTGATGAGATCATACTGGAGAGTTAAATCTAACCAAGCTGGTTATGTTGGAGAAGATGTTGAATCAATATTGTACAAACTACTTGTGGTATATGTACCTTGTACGCAACATGTCACTTGGGACTTGAGATTTGGTTTGATCTTGGGTAATTTCCTCCCTTTACCAAGGATCGGAACAGAGGTTGCTTCTTGGGGGAATGACTTCCTTTTGGTTACGTCAGAAAAGGTGACAGGGTCAGGAATACTAGGTGCTTTATCAGTTTCTTTGATGATTGaaGCAGCTGAGTTCAATGTTCAAGCCGCTCAACAAGGGATAGTTTACATTGATGAAGTTGACAAGATAACAAAGAAGGCTGAGAGCTTAAATATTAGCCGGGATGTTTCTGGAGAGGGTGTTCAGCAGGCACTATTAAAAATGTTGGAAGGAACTATAGTAAACGTTCCTGAGAAAGGAGCAAGGAAGCACCCAAGGGGGGATAACATACAGATTGACACAAAGGATATTCTTTTTATATGCGGTGGAGCATTTGTTGATCTTGACAAAACCATATCAGATCGACGACAAGATTCTTCTATTGGTTTCGGAGCACCAGTTCGTGCCAATATGAGAACCAACAGAGTAACAAGTGCTGTAGTAACATCATCATTACTTGAGTCGGTGGAAAGTGCCGATCTCATTGCATATGGTCTCATACCTGAGTTTATTGGACGTTTTCCAATCTTAGTTAGTTTGTCAGCCTTAACTGAAGATCAACTTGTGCAGGTCCTCACAGAACCAAAAAATGCTCTTGGTAAGCAGTACAAGAAATTGATTGGCATGAATAACGTAAAGCTACACTTCACAGAGAAAGCACTGAAACTGATTGCAGAGAAAGCAATGGCCAAGAATACTGGTGCCAGGGGTTTAAGAGCCATACTGGAAAGCATCCTAACTGATGCCATGTTTGAGATTCCAGATACTAAGACTGGGAGTGACCAGATCGATGCCGTTGTTGTTGATGAGGAATCAGTAGGATCAGTAGATGCTCCTGGATGTGGAGGCAAAATTCTTCACGGACGTGGTGCTTTGGAGTCTTACCTAGCAAAGACAAAGAATTCAGTGGTTAATGGTGAGGTAACTGAACCAGATATACAAGAGGGGGAATCAGAACTTTCTTCTAGAGCCATGAGCAtgtga 2394 0.4361 MSRIFSRWKKLREIAMISSTSCYAETHFAVQSRINFRFNQVRPISTHLNYFHIATLRRRESFIGVQERYKWDHGGSGDTHNRNSPARKIRAEANCPRCAKQMDVFFSNRYFPTSASDSNLIPPISIYEEGGYQTMNLCPNCKTAYYFRPYNTAPLQGSFVEIGRVTNNDVNNTVSKLQRRMSHGKVKDDRESNNGHGSDSGVEDYGHRSYRSNGPRVPFWDTLRSYSDGDGGEPPETWSPPPGSSNGNGLAVHTPPGPPFAPGVNVVRASGPREGGSGGGGGGNGEKTAWGGSNLGKDLPTPKEICKGLDKFVIGQSRAKKVLSVAVYNHYKRIHHASLQKGSGAESGISKALDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQASILSLMRSYWRVKSNQAGYVGEDVESILYKLLVVYVPCTQHVTWDLRFGLILGNFLPLPRIGTEVASWGNDFLLVTSEKVTGSGILGALSVSLMIEAAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLDKTISDRRQDSSIGFGAPVRANMRTNRVTSAVVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLIGMNNVKLHFTEKALKLIAEKAMAKNTGARGLRAILESILTDAMFEIPDTKTGSDQIDAVVVDEESVGSVDAPGCGGKILHGRGALESYLAKTKNSVVNGEVTEPDIQEGESELSSRAMSM 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2611 797 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 497 797 - -
Sto10g2611 797 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 56 403 - -
Sto10g2611 797 SMART AAA_5 362 604 IPR003593 -
Sto10g2611 797 PANTHER ATPASE, AAA-TYPE, CORE-RELATED 56 403 - -
Sto10g2611 797 PANTHER ATPASE, AAA-TYPE, CORE-RELATED 497 797 - -
Sto10g2611 797 MobiDBLite consensus disorder prediction 171 293 - -
Sto10g2611 797 CDD AAA 363 415 - -
Sto10g2611 797 Pfam C-terminal, D2-small domain, of ClpB protein 653 724 IPR019489 -
Sto10g2611 797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 738 IPR027417 -
Sto10g2611 797 MobiDBLite consensus disorder prediction 181 210 - -
Sto10g2611 797 Pfam ATPase family associated with various cellular activities (AAA) 366 421 IPR003959 GO:0005524|GO:0016887
Sto10g2611 797 SMART ClpB_D2_small_2 653 746 IPR019489 -
Sto10g2611 797 Pfam AAA domain (Cdc48 subfamily) 492 646 IPR003959 GO:0005524|GO:0016887
Sto10g2611 797 Gene3D - 652 752 - -
Sto10g2611 797 Gene3D - 293 651 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2611 Sto-Chr10 36361071 36370899 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2611 K03544 - jre:109001374 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2611 10 36361071 36370899 Sto10g2611 10 36361071 36370899 ECH