Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2590 ATGGCTGCCACTCCTACGCTCTCTTCCTCTCTACCCGCAATTTCTCTTCACGCCGCTTCTTCACAAAAGCCCAATCAGCATCTCCTACCTTGTTCTCTCACTCTCTCCTCTCTATTCGGAACCAGACTAACGATTCGCACCTCAACTTCATGTCGTTTCCTCCCCAATAGCAAGTATTGCCGTGCGACATCCGCGACGGTGTCGTTTAGTCTCCCAACTACATGGTCTGCAAGGGCTATAAAGTCATTTGCAATGGCGGAGTTAGAAGCAAGGAAGCTGAAGTATCCCAATACAGGAACTGAGGCTCTTCTTATGGGTATTTTAGTAGAAGGAACAAGTAAAGCTTCAAAGTTCTTAAGGGCGAACGGAATTACTCTTTTCAAAGTACGAGAAGAAACAGTGGAGCTACTTGGGAAATCTGACTTGTATTTCTTTAGTCCTGAGCATCCTCCATTGACAGAACCAGCTCAGAAATCCATTGATTGGGCTGTTGAGGAGAAATTAAAGTCAGGTGAAGGAGGGGAAATAACTGTGACTCATTTGCTTCTTGGAATTTGGTCACAAAAAGAATCAGCAGGTCATAGTATCTTAGCTTCTCTAGGTTTCAATGACGAAAAAGCCAAAGAAGTTGCTGAATCATTGAATGGAGATGTTGATTTGAGCTTTAAAAAGCAAGCTTAA 681 0.4347 MAATPTLSSSLPAISLHAASSQKPNQHLLPCSLTLSSLFGTRLTIRTSTSCRFLPNSKYCRATSATVSFSLPTTWSARAIKSFAMAELEARKLKYPNTGTEALLMGILVEGTSKASKFLRANGITLFKVREETVELLGKSDLYFFSPEHPPLTEPAQKSIDWAVEEKLKSGEGGEITVTHLLLGIWSQKESAGHSILASLGFNDEKAKEVAESLNGDVDLSFKKQA 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2590 226 SUPERFAMILY Double Clp-N motif 75 216 IPR036628 -
Sto10g2590 226 ProSiteProfiles Clp repeat (R) domain profile. 72 217 IPR004176 -
Sto10g2590 226 Pfam Clp amino terminal domain, pathogenicity island component 175 213 IPR004176 -
Sto10g2590 226 Pfam Clp amino terminal domain, pathogenicity island component 86 138 IPR004176 -
Sto10g2590 226 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 11 223 - -
Sto10g2590 226 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 11 223 IPR044217 -
Sto10g2590 226 Gene3D - 74 221 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2590 Sto-Chr10 36203209 36205560 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2590 - - gmx:100786582 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2590 10 36203209 36205560 Sto10g2590 10 36203209 36205560 ECH