Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2589 ATGAGCTTCGCAGCTTACAAGATGATGCACTGCCCAACGGGCGTCGAGAACTGCGCTTCAGGGTTCATCACGCATTCTCGCGCCGACTTCGTTCCCCGTATCCCTCCCATTCAGACCGATGACCTCGAATCGGAGTGGCCAACGAGGCGCGAGATTGGTCCCATTCCGAACCTCATTGTCACAGCGGCGAATGTTTTGGAAGTGTACATTGTGAGGGTGCTTGAAGAAGGAAGCAGGGAGTCTAAGGGTCATGTAGAACCCAAGCGGGGTGGCTTCATGGATGGTCTTGCTGGGGTCTCGCTCGAGCTTGCTTGTCATTACAGGTTGCATGGTAATGTTGAAACCATGGCCGTGTTGAGCATTGGAGGTGGTGAATCTTCTAGGAGGAGAGATTCTATCATCTTAACTTTTAAGGACGCGAAAATTTCAGTTCTAGAATATGATGATTCCCTTCATGGACTTCGAATAAGTTCTTTGCATTGTTTTGAGGGTCCGGAGTGGCTTCATTTGAAAAGAGGCAGAGAACAATTTGCAAGGGGCCCATTGGTAAAGGTTGATCCTCAAGGCAGGTGTGGCGGAGTTCTTGTCTATGATTTGCAAATGATTATACTTAAGGCTGCTCAGGCTGGAACTGGTTTAGTTGGAGAGGATGATGCCTTGGGTTCTGGAGGAGCAGTTGCTGCTCGTATTGAATCTTCTTATATGATGAGTCTACGAGACTTGGATATGAGGCACGTAAAAGATTTTACATATGTACATGGCTATATTGAACCTGTGATGGTGATCCTGCATGAAAGGGAGCTTACTTGGGCTGGACGTGTCTCATGGAAGCACCATACTTGCATGATATCTGCACTTAGTATCAGCACAACCTTGAAGCAGCACCCACTCATATGGTCAGCTGTTAATCTTCCCCATGATGCCTACAAGCTTCTTGCAGTGCCATCCCCGATAGGTGGTGTTCTTGTGTTTGGTGCTAATACTATTCATTATCATAGTCAGTCTGCTTCATGTGCATTGGCGTTGAATAGTTATGCTGTTTCACTTGATAGTAGtCAAGAGATGCCAAGATCGAGTTTCAGCGTGGAGCTTGATGCTGCCTATGCAACTTGGTTGTTGAGTGATGTGGCCTTGCTGTCAACAAAAACTGGTGAACTGCTGTTGCTTACTCTTGTTTATGATGGAAGGGTTGTGCAGAGACTTGATCTTTCCAGGTCAAAGGCTTCAGTTTTGTCATCTGGTATTACGACAATTGGGAATTCTCTGTTTTTTCTAGCCAGCCGATTAGGAGACAGTACGCTGGTGCAATTTTCTTCTGGTTCAGGAATTTCAACACTGTCATCCAATCTAAAGGAAGAGGTAGGTGATATAGAAGGTGATGCTCCTTCAACAAAGCGACTGCGCAGGTCACCTTCTGATGCTTTGCAAGATATGGTTAGTGGTGAGGAGCTCTCCTTGTTTGGATCTACCCCAAACAGAACAGAATCAGCGCAGAAAACCTTCTCATTTGCAGTGAGGGATTCATTCGTTAACATTGGTCCTTTGAAAGACTTCTCATATGGTTTAAGGATAAATGCTGATGCTAATGCAACTGGAATTGCCAAGCAAAGTAACTATGAGTTGGTGTGCTGTTCTGGTCATGGAAAGAATGGCTCTCTCAGTGTTCTTCGGCAGTCAGTTCGCCCAGAAGTGATAACTGAGGTTGATCTTCCTGGTTGCAAAGGAATTTGGACTGTTTATCATAAGAACACACGCTCTCATAATGCTGATTCCTCTAAGCtggctgatgatgatgatgagtatCATGCATATCTTATCATAAGCATGGAGGCCCGTACTATGGTACTGGAAACAGCTGATCTTCTGAGTGAGGTTACTGAAAGTGTGGACTATTATGTTCAAGGAAAAACACTTGCTGCGGGGAATTTATTTGGAAGGCGTCGAGTAATTCAGGTCTACGAACGTGGTGCTCGCATTCTAGATGGCTCTTTTATGACCCAAGATGTAAGCTTTGGAGCTTCAAACTCTGAATCTAGTTCTGGATCTGAGAATACTGTTGTTCTGTCTGTCTCTATAGTTGATCCATTTGTCTTACTCCGAATGAGTGATGGAAGTATTCGACTTTTGGTTGGAGATCCTACTACCTGCACTGTTTCTGTCACTACTACTTCATTTGAGAGTTCAAAAAGATCAGTATCTGCATGTACCCTTTACCATGATAAAGGACCTGAGCCATGGCTGAGGAAGACTAGTACTGATGCATGGCTTTCTACTGGTGTTGGTGAGGCAATTGATGGAACAGATGGTTCAGCTCAAGATCATGGGGATATTTATTGTGTTGTTTGTTATGAAAATGGTGCCCTTGAAATATTTGATGTGCCCAATTTCAGTTGTGTTTTTTCTGTGGAAAAATTTATGTCTGGAAAGAGTCACCTTGTTGATACTCTCATGAAGGAGGTGGCAAAAGATTCTCAAAAAGTAGATGGAGTATCTGAGGAAGTGACCAATCAAGGCAGGAAGGAAAATATACAGAATATGAAGGTTGTAGAGTTGGCCATGCAGAGATGGTCAGGGCAGTATAGCCGTCCATTTCTTTTTGGGATTTTGAGTGATGGAACAATTCTTTGTTACCATGCTTACCTTTATGAAAGTTCAGATGGTACTTCCAAAGTTGAGGATTTAACATATGCACAAGGATCTGTGAGCCTTAACAACACTAGTGCTTCTAGGCTTAGAAATTTGAGATTTGTTCGAGTCCCCTTAGACATATATGCCAGAGAGGAGACGTCGAGTGGATTACCTTGTCAGAGAATTACTATTTTCAAGAATATAGGTGGTTATCAAGGATTTTTTCTGTCAGGGTCAAAACCTTCTTGGATTATGGTGTTAAGAGAACGGCTTCGTGTTCATCCACAGCTGTGTGATGGATCTATTGTTGCTTTTACTGTCCTTCACAATGTGAACTGCAATCATGGTCTCATATATGTTACATCACAGGGCTCTTTGAAGATTTGCCAGCTGCCTTCTGGCTCAAACTATGATAATTACTGGCCCGTACAGAAAGTTTCGCTAAAAGCCACTCCACATCAAGTAACCTACTTTGCAGAGAAGAATTTGTATCCGCTTATTGTCTCAGTTCCTGTTCCTAAGCCACTAAATCAAGTTGTTTCATCTTTGGGTGATCAAGAGGTCAACCAACAGActgaaaatcaaaatttgaattctgATGATCAAAACCGCTTTTACACTATTGATGAATTTGAGGTTCGTATTATGGAGCCGGAAAAATCTGGTGGAACTTGGCAAACAAAGGCAACGATACCTATGCAAAGTTCAGAAAATGCCCTGACTGTGAGAATGGTTACGCTGTTGAATACGGACACAAAAGAGAATGAAACGCTTTTAGCTATTGGCACTGCTTATGTGCAAGGAGAGGATGTTGCTGCTAGAGGGCGTGTCCTTCTGTTTTCTTTGGGGAAAAACACTGATAATAGCCAACCTTTGGTTTCAGAGGTCTACTCAAAAGAACTGAAAGGTGCTATATCTGCCTTGGCGTCACTTCAAGGCCATCTATTAATAGCTTCTGGTCCAAAAATTATTCTGCACAAGTGGACTGGTACTGAGTTGAATGGTATTGCATTTTTTGATGCTCCACCATTACATGTTGTGAGCTTAAATATTGTCAAAAACTTCATACTTATTGGTGACATCCATAAAAGCATTTACTTTCTTAGTTGGAAGGAACAGGGTGCTCAACTTAGCTTATTAGCCAAGGACTTTGGTTCTCTTGATTGTTTTGCAACAGAGTTTTTGATTGATGGAAGTACTTTGAGTCTCATGGTTTCAGATGATCAAAAGAACATCCAGATTTTTTACTATGCGCCAAAGATGTCTGAGAGCTGGAAGGGACAGAAGCTTCTTTCAAGGGCTGAATTTCATGTTGGTGCCCACGTGACTAAATTCTTGCGGTTGCAGATGCTGTCCACCACCCCTTCTGATCGGACTGGTTCTGCTCCAGGCTCTGATAAAACCAATCGTTTTGCTTTATTATTTGGCACCTTAGATGGCAGTATTGGTTGCATTGCACCTCTTGATGAAATCACATTCCGTAGGCTGCAATCTTTACAGAGAAAGCTTGTTGATGCTGTACCACATTTTGCTGGCTTAAATCCAAGAGCTTTCAGACAGTTCCGTTCCAATGGAAAGGCTCATCGGCCTGGCCCTGACAGTATAGTTGACTGTGAACTTCTTTGCCATTTTGAAATGCTTCCATTGGAGGAACAGCTTGAAATTGCTCACCAGGTTGGCACAACTCGATCGCAAATTCTCTCGAATCTAATTGACCTCTCGATCGGAACAAGCTTCTTGTGA 4371 0.4267 MSFAAYKMMHCPTGVENCASGFITHSRADFVPRIPPIQTDDLESEWPTRREIGPIPNLIVTAANVLEVYIVRVLEEGSRESKGHVEPKRGGFMDGLAGVSLELACHYRLHGNVETMAVLSIGGGESSRRRDSIILTFKDAKISVLEYDDSLHGLRISSLHCFEGPEWLHLKRGREQFARGPLVKVDPQGRCGGVLVYDLQMIILKAAQAGTGLVGEDDALGSGGAVAARIESSYMMSLRDLDMRHVKDFTYVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVFGANTIHYHSQSASCALALNSYAVSLDSSQEMPRSSFSVELDAAYATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSRSKASVLSSGITTIGNSLFFLASRLGDSTLVQFSSGSGISTLSSNLKEEVGDIEGDAPSTKRLRRSPSDALQDMVSGEELSLFGSTPNRTESAQKTFSFAVRDSFVNIGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLSVLRQSVRPEVITEVDLPGCKGIWTVYHKNTRSHNADSSKLADDDDEYHAYLIISMEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGARILDGSFMTQDVSFGASNSESSSGSENTVVLSVSIVDPFVLLRMSDGSIRLLVGDPTTCTVSVTTTSFESSKRSVSACTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGSAQDHGDIYCVVCYENGALEIFDVPNFSCVFSVEKFMSGKSHLVDTLMKEVAKDSQKVDGVSEEVTNQGRKENIQNMKVVELAMQRWSGQYSRPFLFGILSDGTILCYHAYLYESSDGTSKVEDLTYAQGSVSLNNTSASRLRNLRFVRVPLDIYAREETSSGLPCQRITIFKNIGGYQGFFLSGSKPSWIMVLRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGSLKICQLPSGSNYDNYWPVQKVSLKATPHQVTYFAEKNLYPLIVSVPVPKPLNQVVSSLGDQEVNQQTENQNLNSDDQNRFYTIDEFEVRIMEPEKSGGTWQTKATIPMQSSENALTVRMVTLLNTDTKENETLLAIGTAYVQGEDVAARGRVLLFSLGKNTDNSQPLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTTPSDRTGSAPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHFAGLNPRAFRQFRSNGKAHRPGPDSIVDCELLCHFEMLPLEEQLEIAHQVGTTRSQILSNLIDLSIGTSFL 1456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2589 1456 Gene3D - 55 448 IPR015943 GO:0005515
Sto10g2589 1456 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 2 1444 - -
Sto10g2589 1456 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1 2 1444 - -
Sto10g2589 1456 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 131 701 IPR018846 -
Sto10g2589 1456 Gene3D - 975 1363 IPR015943 GO:0005515
Sto10g2589 1456 Pfam CPSF A subunit region 1087 1421 IPR004871 GO:0003676|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2589 Sto-Chr10 36181068 36200002 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2589 K14401 - gmx:100785543 2516.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2589 10 36181068 36200002 Sto10g2589 10 36181068 36200002 ECH