Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2586 ATGACGGCGACTGGATCGGGCCTTCTTCTCGGTTCTCTCATCCCTTGTGCTCTCTTCTACTTCCTCCAAATCTATCTCAAACGGCGCCGTTCCGGTGACCCTTCTTCGAGTCCTCCGCCTCCTCCGGCACCGAATGCTCCGGAGGTCCCACGATCGTTATCCCGGTCCAATTTGTCGAGCCGTGGGTTCACTGGTCCGGTTCGAGTGTCCGGCCTCGCAAAATTTCTTTCAGATTCGAAAAATTCGCTGTATGACATTGGGTTGGAGAGGGCGTCGCGGGATCCGTACGACAGATTGAACAATCCAGAAGGGATAATTCAGCTGGGCTTGTCAGAGAATAAGCTTTGTTTGGATTTGATTGGGAAGTGGTTATCAGAGAACTTGAAGAAATCGCTAATGGGAACTGATGATGTTACTTTAAGTGTTAATGGGATTGCAACGTATCAACCATTTGATGGATTGGAGGAATTGAAAGTGGCCATATCAAATTTAATGTCTCATGTGATGGGAGGAATGGTGAAATTTGACCCATCTAATATGGTGTTAACATCTGGAGCAACTCCTGCTATTGAGATGCTATCTTTCTGCTTAGCTGACCCTGGAGATTCTTTCCTTGTCCATACACCTTTTTATCCAGGttTTGACAGGGATGTCAAATGGCGAACTAAAGTAGACCTAATACCTGTTCACTGTCGAAGCACTGACAATTTCACTCCAAGTATCACTGCTCTTGAACAAGCATTTTCTAAAGCTAAAAAAAGTCGAGGTCAAGTTCGTGGAATTCTCATATCCAACCCTGCAAATCTTGGCAATTTGCTGACAAGGGACATGCTTAAGAGTCTTCTGCACTTTGCCCAGGAGAAAAATATCCATATCATTGCTGATGAAATATTTGCAGGATCAGTATATGAGAGGGATAAGTTTGTGAGCATCGCTGAAATTCTTGATTCAGAAGGTCTGGACAAGAGCCGAGTCCATATAATTTATGGCCTGTCAAAGGACCTTTCTCTTCCCGGCTTTAGAGTTGGGGTTATATATTCATTTAACAAGACTGTTTTGACTGCGGCTAGGATGTTAAGTAGATTTTCCTCTATATCTGCTCCAACTCAGAGATTAGTCATTTCAATGCTTTCAGATCAAAGATTTATTCAGGACTACTTCGAAGCCAACCGAAAGAGACTACAAGAAATTCATGATAAACTCGAGACTCATTTAAGTCTCCTGGGAATCAAGTGTGCTAAGAGTTGTGCTGGTATCCACTGTTGGGCTGACATGAGAGGATTAATCCAACCTCAAACTGAGAAAAAGGAACATGAGTTGTGGGAGAAGTTTATGAGTGTTGACCAGTTTCAGTCTTGGGATGTACTTCCTCTTCATCAGTCCTTCAATCATATTGCCACTGGTTGCAAACATACAGCATCCAAAAGCTTTCTTTGTTGTGATATTCTGCATGATCCATTCAAGCAAACAGGAAAACTTCTCCTTCGGCTCATCATAATTAGCTCACCAAGTGTTGGTGGCCTCCTCATCATGACACTGAGTATCCAGCAGAGTATCCAGCAGCTTTTTGAAGGAAGCCAGAATTGGGTGGCATCAAAGGAAAGAGGGTTTCCAGGAAGGAAGCTCCAACTAGACTTGACCTTCCTGTTTCGTAGCTGCTTGTGCTGCTTCCTGAGTTTGAAGCTGGAGAGGAAAATGTCTCAAGATGGTCACTGTTTTGTTCAGTCAATGGATTCTTCTGCAGTGGTACCTGAGTATCTTGatcctgaagaagaagaagatgatgatgcctTTGCTTCTAGGTTTGGAGCCATGGATTCCACTGAGTTGTATGAGAAACCAGGAATGGGCTTTCCAGGCTTTTCTTCCCATGCAAAGGGAACTGAAGCAATATATCTGATTGGAGTTAAAGGAATCTGA 1920 0.4302 MTATGSGLLLGSLIPCALFYFLQIYLKRRRSGDPSSSPPPPPAPNAPEVPRSLSRSNLSSRGFTGPVRVSGLAKFLSDSKNSLYDIGLERASRDPYDRLNNPEGIIQLGLSENKLCLDLIGKWLSENLKKSLMGTDDVTLSVNGIATYQPFDGLEELKVAISNLMSHVMGGMVKFDPSNMVLTSGATPAIEMLSFCLADPGDSFLVHTPFYPGFDRDVKWRTKVDLIPVHCRSTDNFTPSITALEQAFSKAKKSRGQVRGILISNPANLGNLLTRDMLKSLLHFAQEKNIHIIADEIFAGSVYERDKFVSIAEILDSEGLDKSRVHIIYGLSKDLSLPGFRVGVIYSFNKTVLTAARMLSRFSSISAPTQRLVISMLSDQRFIQDYFEANRKRLQEIHDKLETHLSLLGIKCAKSCAGIHCWADMRGLIQPQTEKKEHELWEKFMSVDQFQSWDVLPLHQSFNHIATGCKHTASKSFLCCDILHDPFKQTGKLLLRLIIISSPSVGGLLIMTLSIQQSIQQLFEGSQNWVASKERGFPGRKLQLDLTFLFRSCLCCFLSLKLERKMSQDGHCFVQSMDSSAVVPEYLDPEEEEDDDAFASRFGAMDSTELYEKPGMGFPGFSSHAKGTEAIYLIGVKGI 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2586 639 Gene3D Aspartate Aminotransferase, domain 1 94 446 IPR015422 GO:0003824
Sto10g2586 639 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 330 343 IPR004838 GO:0003824|GO:0009058|GO:0030170
Sto10g2586 639 CDD AAT_like 148 429 - -
Sto10g2586 639 Pfam Aminotransferase class I and II 107 443 IPR004839 GO:0009058|GO:0030170
Sto10g2586 639 Gene3D - 128 379 IPR015421 GO:0003824
Sto10g2586 639 SUPERFAMILY PLP-dependent transferases 75 445 IPR015424 -
Sto10g2586 639 MobiDBLite consensus disorder prediction 31 62 - -
Sto10g2586 639 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 108 134 - -
Sto10g2586 639 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 142 158 - -
Sto10g2586 639 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 179 199 - -
Sto10g2586 639 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 201 222 - -
Sto10g2586 639 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 255 279 - -
Sto10g2586 639 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 290 313 - -
Sto10g2586 639 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 324 348 - -
Sto10g2586 639 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 356 379 - -
Sto10g2586 639 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 6 449 - -
Sto10g2586 639 MobiDBLite consensus disorder prediction 34 48 - -
Sto10g2586 639 PANTHER AMINOTRANSFERASE ACS12-RELATED 6 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2586 Sto-Chr10 36150952 36154404 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2586 K14270 - gmx:100811906 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2586 10 36150952 36154404 Sto10g2586 10 36150952 36154404 ECH