Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2578 aTGAAGAACGAAGAGATTTGTCCCTACACGGTGGTTATAAATACAAGTTGTGACTCTTCAAAATTCATAAGGGATCAGATTAGTATTTCTTTTGGAGATGCTTATGGGAATCAGaTATTTGCACCAAGGCTGGCTAATCCAAACCCTTTTGAGGCAACATTTGAGCAATGTTCTACCAACACATTCCAAATAAATGGTTCTTGTGCTTACCAAATTTGCTATGCTTACCTCAAAGCAAGTGGGCCAGATGATTGGAAGCCAGAAAATGTCACAATTAATGGTCCCACCACAAATTCTACTTCTTTCAACTTCTCCACTATCATCCCCAAAGATCAATGGTATGGCTTCAATTTGTGTGATGATCACCATGATGATTCTTCTTCACACCAAGTTTATACCCACACAATGTTTCTCTATGTGCTACTACTTCTAGGGCTTCTTCCAATTTGCTTTTGGTGGTAA 462 0.3874 MKNEEICPYTVVINTSCDSSKFIRDQISISFGDAYGNQIFAPRLANPNPFEATFEQCSTNTFQINGSCAYQICYAYLKASGPDDWKPENVTINGPTTNSTSFNFSTIIPKDQWYGFNLCDDHHDDSSSHQVYTHTMFLYVLLLLGLLPICFWW 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2578 153 PANTHER EMBRYO-SPECIFIC PROTEIN ATS3B 5 143 - -
Sto10g2578 153 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 5 116 IPR036392 GO:0005515
Sto10g2578 153 PANTHER - 5 143 - -
Sto10g2578 153 Gene3D PLAT/LH2 domain 3 116 - -
Sto10g2578 153 CDD PLAT 7 119 - -
Sto10g2578 153 Pfam Embryo-specific protein 3, (ATS3) 2 119 IPR010417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2578 Sto-Chr10 36066142 36067609 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2578 - - twl:120003437 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2578 10 36066142 36067609 Sto10g2578 10 36066142 36067609 ECH