Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2567 atggtgaAGCTGACAATAGTTGGGAGGGTGAGTGATGGATTGCCTCTAGCTCAAGGATTGAGATATGTGAATGAAGAGAATGGGGTCTTTTCGTTTTACCAGAAACAAGCTCAACTTCTTCTCCAAGAAATTTCTAGAGGCACCTTCATACCTTCCAAGATGACCATTCATATTGATCAAAATTACTGCTTCAACTACTTGATGAAGGATGGAGTTGTTTTCATTGTGTTGTGTGATACCTCGTACCCAACAAAACTGGCTTTCCATTATCTTCAAGATTTACAGAAGGAGTTTCACAAATTTGATAAAACCCTCACACACAAAATCACAAGGCCATACAGCTTTGTCAAATTcgATGGTATAATTGCAAATATTAGAAGACAATACATTGATACAAGAACCCAGGCCAACCTATCAAAACTCATTGCTAATCGGAAACAAGATATAGATATTGTTACTGAAGATATGTCCAACATattaggaagaagaaggagttcAGAACTAATGGGAAGATTACCAGAAACTCCTCCCCCTTCATCCTCAATATGGGGTTCTCCACACCTTGAGGTGATTGCATTGAAATGGACACCTATAATGATCATTTCTATTGCTTCCATGGTTCTATTATGGGCAAGCTTAGTCCTTACAGACTACTATGTAATTTCAAGCTGGTGA 675 0.3644 MVKLTIVGRVSDGLPLAQGLRYVNEENGVFSFYQKQAQLLLQEISRGTFIPSKMTIHIDQNYCFNYLMKDGVVFIVLCDTSYPTKLAFHYLQDLQKEFHKFDKTLTHKITRPYSFVKFDGIIANIRRQYIDTRTQANLSKLIANRKQDIDIVTEDMSNILGRRRSSELMGRLPETPPPSSSIWGSPHLEVIALKWTPIMIISIASMVLLWASLVLTDYYVISSW 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2567 224 ProSiteProfiles Longin domain profile. 6 122 IPR010908 -
Sto10g2567 224 PANTHER VESICLE-TRAFFICKING PROTEIN SEC22B 1 222 IPR044565 GO:0005484|GO:0006888|GO:0006890
Sto10g2567 224 Pfam Regulated-SNARE-like domain 37 119 IPR010908 -
Sto10g2567 224 SMART Longin_2 36 121 IPR010908 -
Sto10g2567 224 CDD Longin 5 129 IPR010908 -
Sto10g2567 224 PANTHER SNARE-LIKE SUPERFAMILY PROTEIN 1 222 - -
Sto10g2567 224 Gene3D Longin domain 1 130 - -
Sto10g2567 224 SUPERFAMILY SNARE-like 1 129 IPR011012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2567 Sto-Chr10 35980098 35983597 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2567 K08517 - gmx:100781527 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2567 10 35980098 35983597 Sto10g2567 10 35980098 35983597 ECH