Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2547 ATGCGAGTCTTCGTTTCGTATGGCGCCAATATCTTCAAGCGCAGGACCCAGACTCAACATAAGATTTCTTCTTCGTTGACTCTGTGCATGATCAATTCCACGAGAGAAATGTCGCAGTCCACTGCGATTCCGAAAAAGCTTCAGAGAGTTCGAGATCATGGCTACGACAATTACATGGAGGTGGAGAAGAAAATGCGCAAGGTTCTCAAATTTCAGGACCTCATCCTCACACAACTCAACCAAACACTTCCAATCTCTCGCCTCGACACCCTCGCTCGCCGTATTGGCTTCAAACAGCTCGAAGCAGGCGCGTTCATTCTCAAATTCCCTCACGTCTTCGAGGTCTACGAGCATCCCGTTCAGCGAATTCTGTTCTGCCGATTGACCCGAAAGGCCGTTCTCCAAATCGAGCAAGAAAGGGAGGCCCTCATCGCGCAGATACCAGACGCTGTCACGCGCCTCCGGAAGCTTCTCATGATGTCTAACACCGGAAGGCTTCGTCTCGAGCATGTTCGTATTGCGCGGTCTGCCTTTGGATTGCCGGACGATTTTGAATACTCGGTGGTTCTCAGGTACCCGCAATATTTTCGGTTGTTTGATGCTAAAGAGACTAGGAATAAGTACATTGAGCTtgtggagagggagagggataGGAATTTAACTGTGTGTGCCATAGAGAAAGCTAGGGAGAGGGAGTATAGATTGAAAGGGATTGATGCTGAAGACATTCGATtctcttttattataaatttcccTCCTGGGTTTAAGATTGGGAAGTATTTTAGAATTGCCATGTGGAAGTGGCAACGGCTTCCATACTGGTCACCTTATGAAGATGTTTCTGGGTATGATTTGCGATCAATCGAGGCTCAAAAGCGAATGGAGAAGAGAGCAGTTGCTACAATCCATGAATTGTTGTCCTTGACAGTGGAGAAGAAGATTACTTTGGAGAGGATTGCGCATTTTCGGATGGCCATGAATTTGCCCAAGAAGTTGAAAGACTTTCTTCTTCAGCATCAGGGGATATTTTATGTCTCCACGAGAGGAAATCATGGAAAACTCCATACTGTTTTCCTTAGGGAGGCATATAGAAAGGGAGAGTTGATAGAGCCCAATGATTTGTATTTAGCTAGAAGGAAGCTAGCTGAGTTGGTTTTGTTGAGTCCCAGGAAAGCAAAAGTTGATAGAGAATTGGTTGGCATTAGGAGAAGTAGAGAAATGGATGAAATGGGGCAAATAAGAAGAGGATATGTTGAGAAGGTTTATGAAGACTTCAAGGGTGGAAATAGTCTGGGGCCAGAGGGGGATGCAGAGGATGATTTGTCATCAGATATAGGCTCTGATGTTGATTCTGATATTGGAGATGAGGATGATGATTTCGAGGATAATGAATCAGTGCAAAGGACATCCTAA 1413 0.4409 MRVFVSYGANIFKRRTQTQHKISSSLTLCMINSTREMSQSTAIPKKLQRVRDHGYDNYMEVEKKMRKVLKFQDLILTQLNQTLPISRLDTLARRIGFKQLEAGAFILKFPHVFEVYEHPVQRILFCRLTRKAVLQIEQEREALIAQIPDAVTRLRKLLMMSNTGRLRLEHVRIARSAFGLPDDFEYSVVLRYPQYFRLFDAKETRNKYIELVERERDRNLTVCAIEKAREREYRLKGIDAEDIRFSFIINFPPGFKIGKYFRIAMWKWQRLPYWSPYEDVSGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKKLKDFLLQHQGIFYVSTRGNHGKLHTVFLREAYRKGELIEPNDLYLARRKLAELVLLSPRKAKVDRELVGIRRSREMDEMGQIRRGYVEKVYEDFKGGNSLGPEGDAEDDLSSDIGSDVDSDIGDEDDDFEDNESVQRTS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2547 470 PANTHER PROTEIN ROOT PRIMORDIUM DEFECTIVE 1 24 449 IPR040295 -
Sto10g2547 470 MobiDBLite consensus disorder prediction 437 463 - -
Sto10g2547 470 MobiDBLite consensus disorder prediction 428 470 - -
Sto10g2547 470 Pfam Plant organelle RNA recognition domain 50 388 IPR021099 GO:0003723
Sto10g2547 470 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 24 449 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2547 Sto-Chr10 35808675 35810087 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2547 - - gmx:100782167 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2547 10 35808675 35810087 Sto10g2547 10 35808675 35810087 ECH