Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2519 ATGACGAAAGTATACAAGAGTACTACTGGAGTCATCATATTGGTGGTGATGATCTCAATATCTTACATAATAAGAGATTGCTACGGGCGTGAGATTATTCTCGACGGCGGCGACTACGACGACGATGACGAGATTATGaagattaataatattaatgtggGAGAATACGAAAAGAAGCTAATGGAGTATTTTTCTAAGGATCCAGTGGATCGTTACGAGGAGGAGGACGAGGTAGTAAGATCCATTCGTCATGTGAACAACTTCATTGGGGCATTTAGCTCTGTGATTTATGGCAACTACGTTGTGAAACCAGGAGACACACTCTTATCCATTCAGGATAAGTTTGTGGATCCTTTTGTTTTGGACAATAACCCAGAAATAATTAGGGACTTTGATGGTCTTGTTGTACCTGGAATGAACAGTGGATTTGGACTTCAATTCTCTGAAGATATAAAGGCATCAATGGGTTTGGGGTCCATACTTTTTATGTGGGCATTTCTGGCTCCAACTCTGTTCTTTCATGTCCTATCTTATTCTGGAAAAGATTATAAATTTGTGAGAGAAGCAACTTCTGCCCCATTGCTTCTATCTTATGACTACATAATCATTGGTGGAGGAACATGTGGGTGTCCCTTAGCAGCAACACTTTCTCAAGGGGCAAGGGTCCTAGTCCTTGAAAGGGGAGGGTCACCCTACACCAACCCAGAGAGAACCAGCCTTAGAAACTTCCTTAACACCCTCTCTGACACAACCCCATCATCATTCTCCCAGCAATTCATATCCACTGATGGGGTCCTAAACACTAGGGCACGTGTCCTTGGGGGTGGCTCTGTCCTTAATGCTGGGTTCTACTCAAGGGCTGGCATAAGGTACATGAAGGGGGCAGGTTGGAATTTGAGTTTGGCCCATGAGTCCTACAATTGGGTTGAGAAGGTTGTGGCCTTTGTGCCACAAGTGAAGCAGTGGCAATCAGCTGTGAGGGATGGGCTCCTAGAAGTTGGGGTACTGCCCTACAATGGTTTCACTTTTGACCACCTTATTGGGACTAAGATTGGAGGGACTATTTTTGATAGAATGGGTCACAGGCATACTGCTGCTGATTTGCTGCAACATGCTGATCCTAGAAGGATTTCTGTCTTTCTTCATGCCACTGTGCAGAAGATTTTGTTTAGGTACAATAAAGGAAGGAGGAGGCCAGAAGCATATGGAGTGATATTTGAGGATGCATTAGGAAGATCACACAGAGCAGTGTTAAGCAGGAGGAGATTGAAGGGTGAGATAATTGTCTCAGCAGGAGCAATTGGGAGCCCACAGCTGCTAATGCTGAGTGGGCTTGGGCCTGCAAAGCATCTTGAGGCCCACAAAATCAGAGTGGTTTTGGATCAGCCATTTGTGGGCCAAGGCATGGCAGATAACCCAATGAACATCCTGGTGGTCCCTTCCCCTGTTCCTGTGGAGATGTCTCTGATCCAAACAGTGGGAATCACCAAATTTGGTAGCTTCATTGAAGGTGCAAGTGGCTACACATTTGGTCATACTTTGTCTCATAGGATTCATGAGATCTTTGAGATGGTCTCAAATcagAGTACCTATTCCTCCATGTTTCTCCCAAAGACCAACAAGAGCAGCAATATTATTGAAGACACCCTAAGATCTTCATCCAATCCAATTCTCAAAGGAGGAGTCTTACTTGAGAAAATCATGGGCCCACTCTCAAAGGGCCATTTGGAGCTCATAACCACTAATCCCAATGATAACCCCTTAGTTACCTTTAATTACTTCAAGGAACCACAAGACCTATGGATGTGTGTTCAAGGCATGGAAACCATCCTCAGACTCATCAATTCCACGGCGTTCTCGAGGTTCCGGTACCGGAACATGCCGGCCCGGGCTCTGATGGAGCTGGTGCTGCAACTTCCAGTGAATTTGAGGCCTAAACATGCTAGTGCTGCATCTTCTTTGAAGCAGTATTGTAGAGACACGGTGTTAACTATTTGGCATTACCATGGAGGATGTCTAGTTGGTAAGGTTGTGGATCATAATTATAAGGTCATTGGTGTTGATTCTTTGAGAGTCATTGATGGTTCAACCTTTCATCATTCTCCTGGAACCAATCCTCAGGCTACTGTTATGATGCTCGGAAGGTAA 2148 0.4446 MTKVYKSTTGVIILVVMISISYIIRDCYGREIILDGGDYDDDDEIMKINNINVGEYEKKLMEYFSKDPVDRYEEEDEVVRSIRHVNNFIGAFSSVIYGNYVVKPGDTLLSIQDKFVDPFVLDNNPEIIRDFDGLVVPGMNSGFGLQFSEDIKASMGLGSILFMWAFLAPTLFFHVLSYSGKDYKFVREATSAPLLLSYDYIIIGGGTCGCPLAATLSQGARVLVLERGGSPYTNPERTSLRNFLNTLSDTTPSSFSQQFISTDGVLNTRARVLGGGSVLNAGFYSRAGIRYMKGAGWNLSLAHESYNWVEKVVAFVPQVKQWQSAVRDGLLEVGVLPYNGFTFDHLIGTKIGGTIFDRMGHRHTAADLLQHADPRRISVFLHATVQKILFRYNKGRRRPEAYGVIFEDALGRSHRAVLSRRRLKGEIIVSAGAIGSPQLLMLSGLGPAKHLEAHKIRVVLDQPFVGQGMADNPMNILVVPSPVPVEMSLIQTVGITKFGSFIEGASGYTFGHTLSHRIHEIFEMVSNQSTYSSMFLPKTNKSSNIIEDTLRSSSNPILKGGVLLEKIMGPLSKGHLELITTNPNDNPLVTFNYFKEPQDLWMCVQGMETILRLINSTAFSRFRYRNMPARALMELVLQLPVNLRPKHASAASSLKQYCRDTVLTIWHYHGGCLVGKVVDHNYKVIGVDSLRVIDGSTFHHSPGTNPQATVMMLGR 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2519 715 PANTHER OSJNBA0019K04.7 PROTEIN 163 715 - -
Sto10g2519 715 Pfam GMC oxidoreductase 198 473 IPR000172 GO:0016614|GO:0050660
Sto10g2519 715 Gene3D - 315 664 - -
Sto10g2519 715 SUPERFAMILY FAD-linked reductases, C-terminal domain 469 671 - -
Sto10g2519 715 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 163 715 - -
Sto10g2519 715 SUPERFAMILY FAD/NAD(P)-binding domain 197 715 IPR036188 -
Sto10g2519 715 ProSitePatterns GMC oxidoreductases signature 2. 432 446 IPR000172 GO:0016614|GO:0050660
Sto10g2519 715 Gene3D - 198 714 IPR036188 -
Sto10g2519 715 Pfam GMC oxidoreductase 570 714 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2519 Sto-Chr10 35466911 35475814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2519 155 715 Miscellaneous Gene Families AT5G51950 58.099 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2519 - - gmx:100780453 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2519 10 35466911 35475814 Sto10g2519 10 35466911 35475814 ECH