Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2506 ATGGCTATAGACTGCATCACAAGCTTTCCTCCTCCCATCTCCATGCCTCACCCTCCTCCAAAACAAGGaaccaaagaagaagaagaagaagaagagaagcctCTGGTTTTTGATGCCTCTGTTCTGAGGCACCAACTTCATCTTCCAAAGCAATTCATTTGGCCAGATGAAGAGAAGCCATGCTTGAATGTTCCTGAACTTGTTGTCCCACTAATTGACCTGAAAGGCTTCCTGTGTGGAGACCCTTTTGCAGCCATGGAAGCTTCCAGACTTGTGGGTGAAGCATGCAAGAAACATGGCTTCTTCCTTGTGGTGAACCATGGGATTGACCCCAGATTGATCTCTGATGCTCACACTTCCATGGATGACTTCTTTGAGCTTCCCCTGTTTCAGAAACAGAGAGCTCAGAGGAAAACAGGGGACCACTGTGGCTATGCTAGTAGCTTCACTGGTAGATTCTCCTCCAAACTTCCATGGAAAGAGACACTCTCCTTCCAATTCTCGCCCGACAAACACTCCCGAAACCTCGTCAAAGACAACCTGTGCCGAACAATGGGCGAAGAATTCGAGCAATTCGGgaTGGTTTACCAGAAGTATTGTGAAGCAATGAGCAACTTGTCTTTAGTGATAATGGAGCTTCTAGGGATGAGTCttggagttggaaggagttggTTTAGGGACTTCTTTGAAGAGAATAATTCAATAATGAGACTCAATTATTACCCACCTTGTCAAAAACCTGACCTCACTTTAGGCACTGGCCCTCATTGTGATCCAACCTCCTTAACCATTCTTCACCAACACAAAGTGGGTGGCCTCCAAGTTTATGTTGACAATGAGTGGCATTCCATTTCCCCAAATTTCAAGGCTTTTGTGGTCAATATTGGTGATACTTTCATGGCACTTTCAAATGGGAGATACAAGAGTTGCTTGCATAGGGCAGTGGTGAACAGGCAAACAACAAGAAAGTCTCTTGCTTTCTTCTTGTGTCCAAGAAGTGACAAAGTGGTGAGTCCACCAAGTGAGCTAGTGGATCAATGGAGTCCAAGGATGTACCCAGATTTCACATGGCCTATGTTGCTTGAGTTCACTCAGAAACATTACAGAGCAGACATGAAAACCCTTGAGAAATTCACCAATTGGgtgcaacaacaacaacaacaacagaaGAAGACAGCCTAA 1182 0.4213 MAIDCITSFPPPISMPHPPPKQGTKEEEEEEEKPLVFDASVLRHQLHLPKQFIWPDEEKPCLNVPELVVPLIDLKGFLCGDPFAAMEASRLVGEACKKHGFFLVVNHGIDPRLISDAHTSMDDFFELPLFQKQRAQRKTGDHCGYASSFTGRFSSKLPWKETLSFQFSPDKHSRNLVKDNLCRTMGEEFEQFGMVYQKYCEAMSNLSLVIMELLGMSLGVGRSWFRDFFEENNSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQHKVGGLQVYVDNEWHSISPNFKAFVVNIGDTFMALSNGRYKSCLHRAVVNRQTTRKSLAFFLCPRSDKVVSPPSELVDQWSPRMYPDFTWPMLLEFTQKHYRADMKTLEKFTNWVQQQQQQQKKTA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2506 393 MobiDBLite consensus disorder prediction 6 32 - -
Sto10g2506 393 PRINTS Isopenicillin N synthase signature 92 109 - -
Sto10g2506 393 PRINTS Isopenicillin N synthase signature 256 277 - -
Sto10g2506 393 PRINTS Isopenicillin N synthase signature 291 317 - -
Sto10g2506 393 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 23 384 - -
Sto10g2506 393 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 384 - -
Sto10g2506 393 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 231 331 IPR005123 -
Sto10g2506 393 Gene3D - 38 363 IPR027443 -
Sto10g2506 393 SUPERFAMILY Clavaminate synthase-like 42 371 - -
Sto10g2506 393 Pfam 2OG-Fe(II) oxygenase superfamily 233 331 IPR044861 -
Sto10g2506 393 Pfam non-haem dioxygenase in morphine synthesis N-terminal 69 173 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2506 Sto-Chr10 35324818 35326381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2506 46 381 Glycosyltransferase AT5G59530 28.571 2.19e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2506 K05282 - gmx:100305378 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2506 10 35324818 35326381 Sto10g2506 10 35324818 35326381 ECH