Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2478 ATGGTGAGCCAGAGGCAGCGACTTGCTCGGAAAAAATACAAAGCAGAGCACCCTGAACTGTTCCCGAATCCAGAGCCAACACCCCCAAAAGACCcagacaagaagaagaagaagaaaccgaAGAGTCCCTTCAAGCGCAAGAAGGGAGAATCAAAAGAACTCGGTGTCACTAATAAGCCCTTCAAAAGTAATTCTCGGAAACACCCACTTAGAGTTCCTGGTATGAAGCCCGGTGAGAGTTGTTTCATCTGTAAAGCTAAAGACCATATTGCCAAATTCTGTGCTCAAAAAGCTGAGTGGGAAAAAAATAAGATATGCTTGCGTTGTAGACGGCGTGGTCATAGAGCCAAGAATTGCCCTGAGGTGAACGATGGCCCCAAGGATGGGAAAATTTGCTATAATTGTGGGGAAACTGGACACTCTCTTTCAAACTGCCCGCAGCCTCTTCAAGATGGGGGAACAAAATTTGCTGAATGCTTTGTGTGCAATGGACGTGGACACTTGAGCAAAAACTGCCCTCAAAATGCTCATGGAATTTATCCAAAGGGTGGTTGTTGTAAAATATGTGGTGGTGTAACACATTTGGCAAAGGATTGTCCTGAGAAAGGGAAAAAAGAGTCTTTTGCCGCTAATGGTTATGGCAATGCTGCATTTGGAAGTGAAGAAAGGCCCAGAAATCAGGTTACCAAGTTAGTGAGTGGGGATGATCTTGAGGACGACTTCATGGTTGAAAACTCCTCAAAATCAAGAAATGTTGATGAGAaaccaaagaagaagaagggtccTACCGTTGCGAATGCGGCGTCTGGAATAGCAGTGAGCGATGAATGTAAAATAAAGTTTCAGGAGCTAAAAGCGAAGAGGAATTACCGATTCATATTGTTCAAGATCGTAGATCAAGAAGTGGTGGTCGATAAAGTTGGGAGCCCTAATGAGACCTACGAGGATTTCACTGCCTCTTTCCCTTCCAATGAGTGTCGCTATGCTATCTTCGATTTTGATTTCACCACTCACGAGAATTGCCAGAAAAGCAAGATCTTCTTCATTGCCTGGGCTCCTGATGCATCAAAAGTGAGAGAAAAAATGGTGTATGCTAGTTCTAAGGACAGATTCAAGAGGGAACTTGATGGTATTCAGTTTGAGCTGCAAGCAACTGATCCTAGTGAGATGAGTTTTGACATCATAAAATCAAGggcatattaa 1203 0.4165 MVSQRQRLARKKYKAEHPELFPNPEPTPPKDPDKKKKKKPKSPFKRKKGESKELGVTNKPFKSNSRKHPLRVPGMKPGESCFICKAKDHIAKFCAQKAEWEKNKICLRCRRRGHRAKNCPEVNDGPKDGKICYNCGETGHSLSNCPQPLQDGGTKFAECFVCNGRGHLSKNCPQNAHGIYPKGGCCKICGGVTHLAKDCPEKGKKESFAANGYGNAAFGSEERPRNQVTKLVSGDDLEDDFMVENSSKSRNVDEKPKKKKGPTVANAASGIAVSDECKIKFQELKAKRNYRFILFKIVDQEVVVDKVGSPNETYEDFTASFPSNECRYAIFDFDFTTHENCQKSKIFFIAWAPDASKVREKMVYASSKDRFKRELDGIQFELQATDPSEMSFDIIKSRAY 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2478 400 MobiDBLite consensus disorder prediction 1 72 - -
Sto10g2478 400 SUPERFAMILY Retrovirus zinc finger-like domains 125 176 IPR036875 GO:0003676|GO:0008270
Sto10g2478 400 ProSiteProfiles ADF-H domain profile. 270 400 IPR002108 GO:0003779
Sto10g2478 400 SUPERFAMILY Actin depolymerizing proteins 266 398 - -
Sto10g2478 400 ProSiteProfiles Zinc finger CCHC-type profile. 159 174 IPR001878 GO:0003676|GO:0008270
Sto10g2478 400 SMART adf_2 275 400 IPR002108 GO:0003779
Sto10g2478 400 Pfam Zinc knuckle 159 174 IPR001878 GO:0003676|GO:0008270
Sto10g2478 400 Pfam Zinc knuckle 131 147 IPR001878 GO:0003676|GO:0008270
Sto10g2478 400 ProSiteProfiles Zinc finger CCHC-type profile. 106 121 IPR001878 GO:0003676|GO:0008270
Sto10g2478 400 Pfam Cofilin/tropomyosin-type actin-binding protein 277 397 IPR002108 GO:0003779
Sto10g2478 400 ProSiteProfiles Zinc finger CCHC-type profile. 132 147 IPR001878 GO:0003676|GO:0008270
Sto10g2478 400 SMART c2hcfinal6 185 201 IPR001878 GO:0003676|GO:0008270
Sto10g2478 400 SMART c2hcfinal6 158 174 IPR001878 GO:0003676|GO:0008270
Sto10g2478 400 SMART c2hcfinal6 131 147 IPR001878 GO:0003676|GO:0008270
Sto10g2478 400 SMART c2hcfinal6 105 121 IPR001878 GO:0003676|GO:0008270
Sto10g2478 400 SMART c2hcfinal6 80 96 IPR001878 GO:0003676|GO:0008270
Sto10g2478 400 Gene3D - 74 127 - -
Sto10g2478 400 Gene3D - 155 214 - -
Sto10g2478 400 Gene3D - 128 154 - -
Sto10g2478 400 Gene3D Severin 260 400 IPR029006 -
Sto10g2478 400 PANTHER OS04G0555800 PROTEIN 1 266 - -
Sto10g2478 400 MobiDBLite consensus disorder prediction 243 261 - -
Sto10g2478 400 CDD ADF_cofilin_like 269 399 IPR017904 GO:0015629|GO:0030042
Sto10g2478 400 MobiDBLite consensus disorder prediction 243 263 - -
Sto10g2478 400 SUPERFAMILY Retrovirus zinc finger-like domains 74 122 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2478 Sto-Chr10 35078809 35088077 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2478 - - cmo:103484078 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2478 10 35078809 35088077 Sto10g2478 10 35078809 35088077 ECH