Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2449 ATGAACTCAAGCGCCACCTTACAAGAAAAGTTCAGACTCCTAGAAGGAGAGGTAGGTAATACCTTGGCATATGAAGCTCCATGTGAGTTTCAGAAGGAAACATTCCAAGAAAACGCGTCTCACCCCGAATTGGAAAACATCTTAAATATGGAAAAATCAGATGACTTGctctgcttctccttcttttctACACTTCCGATCCATAAAAGGGTGTCCTCATTCAGCAGAGACGAAGCAAATCGCTCTGCCCAAACTCCAAGGGAAAGCTTAGTGGAGAAGGTTATAAGAATTTCTGCATTTTTGTTGGTTGCATGGTTTTCCCTGTTtggaaaattttcaaagaaactGTGCAACTTTGGTTGCAACGTTATAGAGCCTGCAACCGTGACTCTTATCATTACAGCTGTAGCTGTGACATTTGGCTCTGCATTCCGAGCTTTAAACTATGGGAAAGAAATGGAGCGTAAAGGTGACTTATCAAAAGCATCCATTACATTGAATAGGTCCCAAGCACTAATGATCCCAGTAATGACCTCTTTCAACCTCCTTTTGATGTTCTACTTGTTCTCATCTGTCTCACAGCTTTTTACAGCTTTGAATGCCATTTTTTCTGTGTCATCCCTTTTCTTCTGCTTGTCTCCGTATGTTGCTCACATGAAATCACAGTTTGGTTTAGCTGACCCGTTTGTTTCACGCTGTTGCTCAAAATCATTTACTCGACTTGAAGGACTCTTATTGGTGGTATGCATTGGGGTCGTGGCAGCTTGGCTTGTTTCTGGTCATTGGATTTTGACCAATTTATTAGGCATATCAATATGTATTGCACTCACCAGCCATGCGCGACTTCCAAACATCAAAATATGTGCAATGCTTCTTCTTTGCCTATTTGTATATGACATTTTCTGGGTTTTCTTCTCTGAAATATTTTTTGGGGCAAATGTTATGGTGTCAGTGGCAACACAACAAGCATCAAATCCTTTTCACACTCTTGCTAATAGTTTAAGCCTTCCTGGAGCGCAAGTGATAACAAAGAAACTGGAGATGCCTGGGAAGATTGTTATCCCACTAAATTTATTCAGTGGAGTTCTCCATGGAGAGAATGCAGCAAACTTCATGATACTTGGTTTAGGAGATATGGCTATCCCTTCGATGCTTCTGGCTTACGTCCTCTGCTTCGATCATCGAAAGAACAGTAATACTGTAAATCTCTTTGAGTTATATTCTTCAAAGGGGCACAAATACATATGGTATGCCCTACCTGGTTATGCAATTGGCTTGGTAACTGCTATAGCTGCTAATGTCTTGACTCACTCACCTCAGCCTGCACTTCTTTATCTGGTACCTTCAACTTTGGGGCCTGTCCTTGTGGTCTCATGGATAAGAAAGGAGCTGATGGAGTTGTGGGAAGGAAGCATGCCAAATATTAGTGATAAAGCTCGCCAAATAGaagtttaa 1455 0.4027 MNSSATLQEKFRLLEGEVGNTLAYEAPCEFQKETFQENASHPELENILNMEKSDDLLCFSFFSTLPIHKRVSSFSRDEANRSAQTPRESLVEKVIRISAFLLVAWFSLFGKFSKKLCNFGCNVIEPATVTLIITAVAVTFGSAFRALNYGKEMERKGDLSKASITLNRSQALMIPVMTSFNLLLMFYLFSSVSQLFTALNAIFSVSSLFFCLSPYVAHMKSQFGLADPFVSRCCSKSFTRLEGLLLVVCIGVVAAWLVSGHWILTNLLGISICIALTSHARLPNIKICAMLLLCLFVYDIFWVFFSEIFFGANVMVSVATQQASNPFHTLANSLSLPGAQVITKKLEMPGKIVIPLNLFSGVLHGENAANFMILGLGDMAIPSMLLAYVLCFDHRKNSNTVNLFELYSSKGHKYIWYALPGYAIGLVTAIAANVLTHSPQPALLYLVPSTLGPVLVVSWIRKELMELWEGSMPNISDKARQIEV 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2449 484 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 3 122 472 - -
Sto10g2449 484 PANTHER SIGNAL PEPTIDE PEPTIDASE 122 472 IPR007369 GO:0004190|GO:0016021
Sto10g2449 484 SMART psh_8 162 461 IPR006639 GO:0004190|GO:0016021
Sto10g2449 484 Pfam Signal peptide peptidase 163 471 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2449 Sto-Chr10 34748492 34753745 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2449 K09598 - mnt:21389933 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2449 10 34748492 34753745 Sto10g2449 10 34748492 34753745 ECH