Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2419 ATGGACGCGGCCGCCGCTCCTCTGCTCACTAAATCCGACGCGCCGTCGTCGTCGTCGGAGGAGGTCATCGGCGACTACGCTCCGGTGACCGGGTTCAAGGAGGCGAGGGAGGTCGTGTGGGTGGAATCCAGGAAATTGTGGCTCATTGCATTGCCTATTATCTTCAACACTCTCTGCCAATTCGCCGTTAACTCCGTCACCAACATGTTCGTCGGCCATCTCGGAGACGTTGAGCTCTCTGCTGTTTCTCTCTCGCTCTCTGTCATCGGCACCTTCTCTTTCGGCTTCatgCTTGGCATGGGGAGTGCACTTGAGACACTATGTGGTCAAGCTTTTGGTGCTGGGCAGGTTTATTTGCTTggcgtgtacatgcaacgctcaTGGATAATCCTATGGGTCACCTGCATTTTGCTCTTGCCAATTTACATATGTTCAGCTCCATTATTGAAACTTCTTGGCCAACAACATGATATAGCTGATCTTGCAGGGAATTTCACTCTTTTGGTTATTCCTCAGTTTTTCTCACTTGCTATCAATTTTCCAACCCAAAAGTTCCTTCAAGCTCAAAGCAGGGTTAATGTGATTGCATGGATTGGGTTTGTCGCTCTGGCTATTCACATTGGGTTGCTATATCTCTTCATATATGTATTCAACTGGGGTTTAACCGGGGCAGCTGTGGCATTTGATCTAACAAGTTGGGGAATTGCATTGGCTCAAGTTGCTTATGTCATGGGTTGGTGCAAGGAAGGATGGAAAGGATTCTCATGGATGGCATTCAAGGATATATGGGCTTTTGTCAGGCTCTCTCTTGCATCAGCTGTAATGCTTTGCCTTGAGGTTTGGTATATGATGAGCCTTATAGTTCTTACCGGCCACCTTGATAATGCAGTGATAGCTGTTGATTCCCTCTCTATTTGCATGAATTACAATGGATGGGAAGCCATGCTGTTTATTGGAATAAATGCAGCAATCAGTGTCAGAGTTTCCAATGAACTTGGTCTGGGACGTCCAAGAGCTGCAAAATACACCGTCTATGTGACAGTTTTTGAGTCTCTTGTGATTGGACTAGTTTTCATGGTTCTCATTTTGGTAACTAGAGACTATTTCGCCATTGTCTACACAACCAGCAAGCCTTTGCAAGAGGCAGTCTCTAGCCTAGCTGAACTCCTTGCTGTGACAGTAGTGCTCAACAGCGTTCAACCCGTAATTTCTGGCGTTGCTGTTGGAGGTGGATGGCAGGCACTAGTGGCTTACATCAATGTGGGCTCTTATTACATTTTTGGACTTCCACTAGGATTCTACCTTGGTTATGTGGCgaagtttggggttaagGGACTTTGGGGAGGAATGATATGCGGAACTGCTCTACAGACTTTGTTGCTTATCATTGTACTTTATAAAACCAATTGGAACAAAGAGGTGGAACAAACAAGTGAACGAATGAAGAAATGGGGTGGGCAAGAATTCAAAGTTGATCAAGCGTAG 1485 0.4478 MDAAAAPLLTKSDAPSSSSEEVIGDYAPVTGFKEAREVVWVESRKLWLIALPIIFNTLCQFAVNSVTNMFVGHLGDVELSAVSLSLSVIGTFSFGFMLGMGSALETLCGQAFGAGQVYLLGVYMQRSWIILWVTCILLLPIYICSAPLLKLLGQQHDIADLAGNFTLLVIPQFFSLAINFPTQKFLQAQSRVNVIAWIGFVALAIHIGLLYLFIYVFNWGLTGAAVAFDLTSWGIALAQVAYVMGWCKEGWKGFSWMAFKDIWAFVRLSLASAVMLCLEVWYMMSLIVLTGHLDNAVIAVDSLSICMNYNGWEAMLFIGINAAISVRVSNELGLGRPRAAKYTVYVTVFESLVIGLVFMVLILVTRDYFAIVYTTSKPLQEAVSSLAELLAVTVVLNSVQPVISGVAVGGGWQALVAYINVGSYYIFGLPLGFYLGYVAKFGVKGLWGGMICGTALQTLLLIIVLYKTNWNKEVEQTSERMKKWGGQEFKVDQA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2419 494 PANTHER PROTEIN DETOXIFICATION 24 479 - -
Sto10g2419 494 TIGRFAM matE: MATE efflux family protein 52 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto10g2419 494 PANTHER MULTIDRUG RESISTANCE PROTEIN 24 479 - -
Sto10g2419 494 CDD MATE_eukaryotic 42 476 IPR045069 GO:0042910|GO:1990961
Sto10g2419 494 MobiDBLite consensus disorder prediction 1 21 - -
Sto10g2419 494 Pfam MatE 52 212 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto10g2419 494 Pfam MatE 272 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2419 Sto-Chr10 34447758 34451059 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2419 K03327 - pvy:116139562 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2419 10 34447758 34451059 Sto10g2419 10 34447758 34451059 ECH