Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2387 ATGGTGTTCCTAAATGTGCCAAGCATTTCCAAGTTACAATGGCACCCTTTCACAGTGACTTCTAGCTCTAATATGGACTCAGATGAGCTGAGTGTTGCTATCAAAACTCAGGGATCATGGTCTCACAAACTTTATGATATCCTTCTTTCTTCTAATTTGGATCGTCTTCAAGTCTCTCTTGAAGGACCTTATGGCCCTTCCTCTTCTCATTTTCTAAGACACGAGCAGCTAATATTAGTAAGTGGAGGAAGTGGTATTACTCCTTTCGTATCCATAATCCGCGACCTCCTCTCTCAAACTCAATCACAACTACAAAACCAAAACgaccaaaacgacgtcgttgtCATCCCCCGAGTCCTCCTCATCTGTGCCTTCAAATCCTCTTCCGATCTAACCCTCCTCGACCTCATCCTACCGCTCACTCCCTCCCCCTCCGCCTCAACGGCCCAGATCTCACGCCTCCACATCCAGATCCAAGCCTACGTCACCCGCGAGGCCCACGAGCCCCCACCACCACAAGCCCAAGCCCACACCACCCGAACCCTATGGTTCAAGCCCAGCCCGACGCTGGACTCGCCCATCTCGCCCGTTCTGGGCCCAAACAATTGGCTCTGGCTCGCTGTCATAATCTCCTCCTCCTTCCTAATGTTCTTGCTCCTTCTCGGACTCGTCACTCGTTACTATATTTACCCTCTCGAGAATGAAGGGCCCAGTGGTGGGGTCTACCATTGGACCTTCAAGGTCTTGTGGTTTCTTTTCCTGCAATGCGCAGCGATTTGGGTGTGCTGTAGTGTGGTTTTCGTGTGGTGCAAGAGACGGAGTGGTCTGGAGAGTAGGCAGATTTTGAACGTGGAATGTCCCACATCGGAGGAATCTCCAGGGTCTTGGAGGATATATGGATCGGAGCGAGAGGTTGAAAGTGTTCCGCGTCGGTCACTTTTGGAAGCTACTAAGGTGTATTATGGTTCAAGACCTGATTTGAAAAAAATTCTGAGTGAGTGCAAGGGAGATGACGTTGGAGTACTAGTTTGTGGGCCAAAGAAGATGAGACATGAAGTTGCCACTTTATGTTCATCTCATTCTTCTGGGAATAATCTCCATTTTGAGGCCATTAGCTTTAACTGGTGA 1128 0.4823 MVFLNVPSISKLQWHPFTVTSSSNMDSDELSVAIKTQGSWSHKLYDILLSSNLDRLQVSLEGPYGPSSSHFLRHEQLILVSGGSGITPFVSIIRDLLSQTQSQLQNQNDQNDVVVIPRVLLICAFKSSSDLTLLDLILPLTPSPSASTAQISRLHIQIQAYVTREAHEPPPPQAQAHTTRTLWFKPSPTLDSPISPVLGPNNWLWLAVIISSSFLMFLLLLGLVTRYYIYPLENEGPSGGVYHWTFKVLWFLFLQCAAIWVCCSVVFVWCKRRSGLESRQILNVECPTSEESPGSWRIYGSEREVESVPRRSLLEATKVYYGSRPDLKKILSECKGDDVGVLVCGPKKMRHEVATLCSSHSSGNNLHFEAISFNW 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2387 375 Gene3D - 264 374 IPR039261 -
Sto10g2387 375 Gene3D - 58 195 IPR039261 -
Sto10g2387 375 CDD NOX_Duox_like_FAD_NADP 2 164 - -
Sto10g2387 375 Pfam FAD-binding domain 2 68 IPR013112 GO:0016491
Sto10g2387 375 PRINTS Cytochrome B-245 heavy chain signature 56 69 IPR000778 GO:0016020|GO:0016491
Sto10g2387 375 PRINTS Cytochrome B-245 heavy chain signature 79 96 IPR000778 GO:0016020|GO:0016491
Sto10g2387 375 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 75 370 IPR039261 -
Sto10g2387 375 PANTHER FERRIC REDUCTION OXIDASE 4-RELATED 1 374 - -
Sto10g2387 375 PANTHER NADPH OXIDASE 1 374 - -
Sto10g2387 375 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 1 70 IPR017927 GO:0016491
Sto10g2387 375 Pfam Ferric reductase NAD binding domain 74 358 IPR013121 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2387 Sto-Chr10 34117546 34122567 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2387 1 375 Miscellaneous Gene Families AT5G23990 54.737 8.32e-138 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2387 K00521 - gmx:112998154 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2387 10 34117546 34122567 Sto10g2387 10 34117546 34122567 ECH