Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2383 ATGGAAAAGGCCAGTGCTAGTGAAGGGTCCTCTTGGGATTACCACAGTAACAGAGCTCTTCTTCTTTGTCATGTGGGAAGCAAAGCTAGAAGATACAGCACTTACTTTAGGCCTTGTTGGGAATATATGCTTAGTATTTCTGTTTTTTCCAGTGACAAGAAGTTCTTCAATTTTGCAGCTCATTGGCCTAACCTCAGAAGCAAGCATCAAATTCTCAAATGGGATAAAACTGGCATCTCAAATGTTGCAGGAGAAATTTCTTTGCTTGCAGGATTAATCTTATGGTGTACTACTTTCCCTAGAATAAGGCGAAAAGCCTTTGAGCTCTTCTTCTACACTCATTACCTATacattgtttttgttgttttctttgTGCTTCATGTGGGATTCTCCACTATCTGCATAATACTTCCCGGATTTTACTTGTTCTTAATCGATCGGTTCCTGCGGTTCCTTCAGTCTCAACAGCGAGTTCGGTTGGTCTCGGCTCGAGTTTTGCCTTGTGAAGCTTTTGAACTGAATTTCTCCAAGAATCCAGGGTTGTGCTATGCTCCTACAAGTTCCATTTTCATAAATGTTCCTAGTATTTCCAAATTGCAGTGGCATCCCTTTACTATCAGTTCCAGCAGTGAAACTGATTCTGATACACTAAGCATTGTAGTCAAAGTTGCTGGAAGATGGTCAAATACTTTGTATCAGAAACtatcttcttcatctccattgGATCACCTTCAAGTCTCAGTTGAAGGACCTTATGGACCCACTTCAACCTCTTTCTCAAGGCATGAAATGCTGGTAATGGTGAGTGGAGGAAGTGGGATTACTCCTTTCATCTCCGTAATCCGCTCGCTTCTCTTCCGAGCCGACTCGGACCGAAGCGGACGAACTCCTAGGGTTCTTCTCGTTTGTGCTTTCAAGAATTCCCTTGATCTCACCATGCTAGACCTCATCCTTCCACCTTCAGGCACCATCTCCAATATCTCAAACTTGCAGCTCCAAATTGAAGCCTATGTgacaagagagaaagaagagccATTGAAACATGAAAAGAGGCTTCTTCAAACAATAAGGTTCAAACCGAACAATGCAGCATTGGATGAGCCAATTTCTTCAGTCTTAGGCCAAAACAATTGGCTCTATCTTGGCATAATCATctcttcctcttttattttgttcCTTCTACTTATTGCCTTCCTTGATAGATATTACATTTACCCAATTGACCATAACTCCAACTTAATATACCCTTATGTCTCAAGATCTTTTTTAGACATGGGATTCTTGTGTGTGTGCATAGCTATTACTGCTACTTCTGCTTTCTTGTGGAACAAGAAACAGAATAAGGATTTGAAGCAGATTAAGAATATGAACACAGAATCTACTGTGGATCTTCCAGATTCAGAGTACTATAATTCTGAGAGAGAATTGGAGAGTCTTCCACTTCAGTCCTTTGTTCAAGCAACTAAAGTGCATTATGGTGGAAGGCCTGACTTGAAAAAAATATTGGATGGGTGTGAAGGATCAAGCATTGGAGTTATGGTTAGTGGTCCAAGGAAATTGAGACAAGAAGTAGCATCAATATGTGCTTCTAATTTCACAGATAACCTTCATTTTGAGTCCATTAGCTTCAGCTGGTGA 1638 0.3883 MEKASASEGSSWDYHSNRALLLCHVGSKARRYSTYFRPCWEYMLSISVFSSDKKFFNFAAHWPNLRSKHQILKWDKTGISNVAGEISLLAGLILWCTTFPRIRRKAFELFFYTHYLYIVFVVFFVLHVGFSTICIILPGFYLFLIDRFLRFLQSQQRVRLVSARVLPCEAFELNFSKNPGLCYAPTSSIFINVPSISKLQWHPFTISSSSETDSDTLSIVVKVAGRWSNTLYQKLSSSSPLDHLQVSVEGPYGPTSTSFSRHEMLVMVSGGSGITPFISVIRSLLFRADSDRSGRTPRVLLVCAFKNSLDLTMLDLILPPSGTISNISNLQLQIEAYVTREKEEPLKHEKRLLQTIRFKPNNAALDEPISSVLGQNNWLYLGIIISSSFILFLLLIAFLDRYYIYPIDHNSNLIYPYVSRSFLDMGFLCVCIAITATSAFLWNKKQNKDLKQIKNMNTESTVDLPDSEYYNSERELESLPLQSFVQATKVHYGGRPDLKKILDGCEGSSIGVMVSGPRKLRQEVASICASNFTDNLHFESISFSW 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2383 545 SFLD Ferric reductase subgroup (FRE) 69 545 - -
Sto10g2383 545 PRINTS Cytochrome B5 reductase signature 181 188 - -
Sto10g2383 545 PRINTS Cytochrome B5 reductase signature 266 285 - -
Sto10g2383 545 SUPERFAMILY Riboflavin synthase domain-like 156 254 IPR017938 -
Sto10g2383 545 Pfam Ferric reductase NAD binding domain 262 529 IPR013121 GO:0016491
Sto10g2383 545 Pfam Ferric reductase like transmembrane component 69 125 IPR013130 -
Sto10g2383 545 PANTHER NADPH OXIDASE 57 544 - -
Sto10g2383 545 PANTHER FERRIC REDUCTION OXIDASE 4-LIKE 57 544 - -
Sto10g2383 545 SFLD Ferric Reductase Domain 69 545 - -
Sto10g2383 545 Gene3D Translation factors 151 250 - -
Sto10g2383 545 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 246 325 IPR039261 -
Sto10g2383 545 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 153 258 IPR017927 GO:0016491
Sto10g2383 545 Pfam FAD-binding domain 157 256 IPR013112 GO:0016491
Sto10g2383 545 Gene3D - 251 376 IPR039261 -
Sto10g2383 545 Gene3D - 425 543 IPR039261 -
Sto10g2383 545 CDD NOX_Duox_like_FAD_NADP 160 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2383 Sto-Chr10 34079144 34084486 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2383 58 545 Miscellaneous Gene Families AT1G01580 53.455 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2383 K00521 - gmx:100779692 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2383 10 34079144 34084486 Sto10g2383 10 34079144 34084486 ECH