Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2297 ATGGCTCAAGTCGTGGCCACGCGATCCATCCACTCCTCCTTCTCCTTGTCCTCCCACTCTGGATCTGCACAAGACAGAGCCGAGAAGCTCTTGAAGCCTTCGAGTTTCTCTTCCGCAGTGTTCGCGCCTCAGAAGGCCTCCAAGGTTGGCTCCCGAAGAAGCTGCCAGATCACCGCGAGGAAATCTGCGGCAGCCGCATCCACTGAAGTCATTCCCGTGACTCCCGCGGAGGAATTGAAGATTGCGGAGCAGTTGCATCATTTGCGGGAGCTGCAACAATTCGGTGAGACGGCGGTTGGTGGTATGTGGTCGAAGCCCACGTTTAGGCGGAAGACGAAGATAGTTTGTACTATTGGTCCATCTACGAACACTCGCGAGATGATTTGGAAGCTGGCTGAGGCGGGGATGAATGTTGCTCGCCTCAATATGTCTCATGGAGACCACGCTTCTCATCAGAAAGTTATTGACTTGGTTAAAGAGTATAATGCACAATCGAAGGACAATGTGATTTCGATAATGCTTGACACCAAGGGTCCTGAGGTTAGGAGTGGAGATTTGCCACAACCAATCACATTAAATAGTGGTCAAGAATTCACTTTTACAATTCAGAGAGGTGTTGGAAATGCAGAGTGTGTTAGTGTAAACTATGATGATTTTGTCAATGATGTGGAAGTTGGAGACATGCTTCTTGTTGATGGTGGTATGATGTCTTTGGTAGTAAAATCAAAGACAGAAGATTCAGTGAAATGTGAAGTTGTTGATGGAGGAGAACTGAAATCAAGGCGGCATTTGAATGTTCGAGGAAAAAGTGCAACACTTCCTTCCATTACTGAGAAGGACTGGGATGACATCAAATTTGGAGTAGATAACCAAGTTGATTTCTATGCTGTTTCCTTTGTTAAGGATGAGGAAGTGGTTCATGAACTGaagaattatttaaaaaGTCGTGGTGCTGATATACATGTCATCGTGAAGATTGAAAGTGCAGACTCTATACCAAACTTGCATTCAATTATCACAGCATCTGATGGGGCTATGGTTGCAAGAGGAGATCTTGGTGCAGAGCTCCCCATTGAGGAGGTTCCACTTTTGCAGGAAGAGATAATTACGATTTGTCGTAGCATGGGGAAGGCTGTTATTGTAGCAACTAATATGTTGGAAAGCATGATTGTTCACCCAACACCAACCAGAGCAGAAGTATCAGATATTGCAATTGCAGTTCGAGAAGGTGCTGATGCAGTCATGCTTTCTGGAGAAACTGCTCATGGGAAGTTCCCACTGAAAGCTGTAAAAGTGATGCACACTGTAGCATTACGGACAGAAGCAACCATTCCAGGAGGTGAAATGCCACCTAATCTTGGTCAAGTATTCAAGAACCACATGAGTGAGATGTTTGCATACCATGCAACAATGATGTCTAACACCCTTGGAACATCGACTGTGGTCTTTACTAGATCGGGTTTTATGGGTATCCTACTGAGCCACTACAGACCTTCAGGCACCATATTTGCTTTTACAGACGATAAGCGGATACAGCAGCGACTGGCTTTGTATCAAGGAGTGTGTCCTATATACATGGACTTCTCTGAAGATGCTGAAGAGACTTTCGCAAGAGCCTTGGGTTTGCTGAAGAAGCAAGGAATGGtgaaggaaggagaagaagtggCTCTTGTACAGAGTGGAAGACAACCCATATGGAGGTCCCAATCCACTCACAATATTCAGGTCCGAAAAGTCTGA 1740 0.4477 MAQVVATRSIHSSFSLSSHSGSAQDRAEKLLKPSSFSSAVFAPQKASKVGSRRSCQITARKSAAAASTEVIPVTPAEELKIAEQLHHLRELQQFGETAVGGMWSKPTFRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVISIMLDTKGPEVRSGDLPQPITLNSGQEFTFTIQRGVGNAECVSVNYDDFVNDVEVGDMLLVDGGMMSLVVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDEEVVHELKNYLKSRGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIITICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGEMPPNLGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMGILLSHYRPSGTIFAFTDDKRIQQRLALYQGVCPIYMDFSEDAEETFARALGLLKKQGMVKEGEEVALVQSGRQPIWRSQSTHNIQVRKV 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2297 579 ProSitePatterns Pyruvate kinase active site signature. 320 332 IPR018209 GO:0004743|GO:0006096
Sto10g2297 579 PRINTS Pyruvate kinase family signature 168 184 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Sto10g2297 579 PRINTS Pyruvate kinase family signature 292 306 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Sto10g2297 579 PRINTS Pyruvate kinase family signature 322 348 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Sto10g2297 579 PRINTS Pyruvate kinase family signature 349 373 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Sto10g2297 579 PRINTS Pyruvate kinase family signature 374 398 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Sto10g2297 579 PRINTS Pyruvate kinase family signature 399 417 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Sto10g2297 579 PRINTS Pyruvate kinase family signature 418 434 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Sto10g2297 579 Gene3D - 452 579 IPR036918 -
Sto10g2297 579 Pfam Pyruvate kinase, barrel domain 110 445 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Sto10g2297 579 Gene3D - 112 437 IPR040442 -
Sto10g2297 579 PANTHER PYRUVATE KINASE 37 579 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Sto10g2297 579 PANTHER PLASTIDIAL PYRUVATE KINASE 2 37 579 - -
Sto10g2297 579 SUPERFAMILY PK C-terminal domain-like 428 579 IPR036918 -
Sto10g2297 579 Gene3D - 180 273 IPR015806 GO:0004743|GO:0006096
Sto10g2297 579 SUPERFAMILY PK beta-barrel domain-like 179 270 IPR011037 -
Sto10g2297 579 TIGRFAM pyruv_kin: pyruvate kinase 110 579 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Sto10g2297 579 Pfam Pyruvate kinase, alpha/beta domain 467 560 IPR015795 -
Sto10g2297 579 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 102 444 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2297 Sto-Chr10 33098509 33105420 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2297 K00873 - gmx:100809327 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2297 10 33098509 33105420 Sto10g2297 10 33098509 33105420 ECH