Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2296 ATGTCCACTACTACAAACTCTCATCATCCTTTCCCACTTCTCCTCCtctccctcctcctcctcctcaatCCCTCCTTCTCGGCCGCCGGCCGCGGCGGCATCGCGGTCTATTGGGGCCAAAACGGCAACGAGGGGACGCTCTCGGAGGCGTGCGCCACCGGGAGATACACCCACGTCAACATCGCCTTCCTCAACGAGTTTGGCAACAACGGTCAGACCCCAGTAATGAACCTCGCAGGCCATTGCAACCCTTCAATCCCCAATTCTTGCACCAAGTTCTCCTCTGAGATCAAAGAGTGCCAGCAAAAAGGCATCAAGGTCTTGCTCTCCATCGGCGGCGGCATCGGGAGCTACTCCCTCGCCTCGCCGGAGGACGCCCGGAACGTGTCCACATTCTTGTGGGACACTTTCTTGGGGGGCAACTCATCGTCGAGGCCTCTAGGCGACGCCGTTTTGGATGGCGTAGATTTCGACATCGAGCTGGGGTCCACCCTATATTGGGAGGACCTCGCTCGTTTCTTAAAGGCTTATAATAACAAGGGGAGGGCAGGAGAAAGGAGGGTGTACCTAAGTGGGGCCCCTCAGTGTCCTATTCCGGATAAGTTTTTGGGCACCGCCCTTAATACGGGGCTTTTTGATTTTGTGTGGGTGCAGTTTTATAATAATCCTCCATGTCAGTATAATAGCGCTAATGGGAATGTTAGTGACCTTGTGAGTTCGTGGGAGAAGTGGACGAGTTCGGTGCCGGCGAGGCGGATATTTTTGGGGTTGCCGGCGGCTCCGGCGGCCGCGGGTAGCGGGTATGTTCCGGCGGATGTGCTGACGTCGGAGATTTTGCCGGTGATCAAGAAATCGCCTAAGTATGGAGGGGTCATGCTGTGGTCAAGGTTTTATGATAACCAAAGTGGGTATAGTAGTTCCATTATTAATAGCTTGTGA 939 0.5325 MSTTTNSHHPFPLLLLSLLLLLNPSFSAAGRGGIAVYWGQNGNEGTLSEACATGRYTHVNIAFLNEFGNNGQTPVMNLAGHCNPSIPNSCTKFSSEIKECQQKGIKVLLSIGGGIGSYSLASPEDARNVSTFLWDTFLGGNSSSRPLGDAVLDGVDFDIELGSTLYWEDLARFLKAYNNKGRAGERRVYLSGAPQCPIPDKFLGTALNTGLFDFVWVQFYNNPPCQYNSANGNVSDLVSSWEKWTSSVPARRIFLGLPAAPAAAGSGYVPADVLTSEILPVIKKSPKYGGVMLWSRFYDNQSGYSSSIINSL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2296 312 PANTHER ACIDIC ENDOCHITINASE 13 311 - -
Sto10g2296 312 PANTHER ENDOCHITINASE 13 311 - -
Sto10g2296 312 SUPERFAMILY (Trans)glycosidases 31 309 IPR017853 -
Sto10g2296 312 Gene3D Glycosidases 32 312 - -
Sto10g2296 312 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 32 312 IPR001223 GO:0005975
Sto10g2296 312 Pfam Glycosyl hydrolases family 18 34 299 IPR001223 GO:0005975
Sto10g2296 312 CDD GH18_hevamine_XipI_class_III 32 310 IPR045321 -
Sto10g2296 312 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 152 160 IPR001579 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2296 Sto-Chr10 33095049 33095987 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2296 1 312 Glycoside Hydrolase AT5G24090 61.538 1.87e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2296 K01183 - gmx:100818728 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2296 10 33095049 33095987 Sto10g2296 10 33095049 33095987 ECH