Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2278 ATGGCTACCCTCAAACACCCTTCACTCCTTCTCTTCCCTCTCCTTCTCATCTCCCTCTTCATCCCATCCTCCCACGCCGCCGGCGCCATTGCCGTCTACTGGGGCCAAAATGGCGGCGAAGGCACCTTAGCCGATGCCTGCAACACCGGAAACTACCAATTCATCAACACCCCACAACTCAACCTCGCCGGCCACTGCAACCCCGCCGACAACAATGGCTGCTCCGGCCAGAGCACCGATATCAAGACATGCCAAGCCAAAGGAATCAAAGTCCTCCTCTCCCTTGGAGGCTCCACTAACACCTACTCCCTCAACTCGGCCGACGAGGCGACGGACCTCGCCGCCTACATCTGGAACAACTTCCTCGGCGGAACCTCGGACTCTCGGCCTCTCGGCGACGCCGTGTTGGACGGCGTCGACTTCGACATCGAGACCGGTACAGGGCTATACTGGGACGACCTCGCTCGGGCTTTGAATTCATACAGCAGCCAGAAAAAAGTGTATTTAGCGGCGGCTCCACAGTGTCCCTACCCTGATGCTAATTTAAACGCTGCGATAAATACGGGGCTTTTCGATTATGTGTGGGTGCAATTCTATAATAACCCTCAATGTCAATACAGTGACGGGAATATTAACAATCTTCTGAGTGCATGGGACCAATGGACTTCGTCACCGGCTAACAAGGTTTTCTTGGGGCTGCCGGCGTCTTCCGACGCTGCTCCGAGCGGCGGTTTTATCCCGGCGGATGCGTTGATATCGCAGGTTCTTCCGGCGATCTCGAGTTCTAGTAAGTACGGTGGGGTGATGCTATGGAATAGGTATAATGACGTTCAGAGTGGGTACAGTGATGCCATTAAGGATGTTGTTTga 870 0.5448 MATLKHPSLLLFPLLLISLFIPSSHAAGAIAVYWGQNGGEGTLADACNTGNYQFINTPQLNLAGHCNPADNNGCSGQSTDIKTCQAKGIKVLLSLGGSTNTYSLNSADEATDLAAYIWNNFLGGTSDSRPLGDAVLDGVDFDIETGTGLYWDDLARALNSYSSQKKVYLAAAPQCPYPDANLNAAINTGLFDYVWVQFYNNPQCQYSDGNINNLLSAWDQWTSSPANKVFLGLPASSDAAPSGGFIPADALISQVLPAISSSSKYGGVMLWNRYNDVQSGYSDAIKDVV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2278 289 Gene3D Glycosidases 28 289 - -
Sto10g2278 289 PANTHER ENDOCHITINASE 15 288 - -
Sto10g2278 289 SUPERFAMILY (Trans)glycosidases 27 285 IPR017853 -
Sto10g2278 289 CDD GH18_hevamine_XipI_class_III 28 287 IPR045321 -
Sto10g2278 289 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 136 144 IPR001579 GO:0004553|GO:0005975
Sto10g2278 289 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 289 IPR001223 GO:0005975
Sto10g2278 289 PANTHER ACIDIC ENDOCHITINASE 15 288 - -
Sto10g2278 289 Pfam Glycosyl hydrolases family 18 30 246 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2278 Sto-Chr10 32889965 32890867 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2278 1 285 Glycoside Hydrolase AT5G24090 53.356 9.19e-111 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2278 K01183 - gmx:100810929 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2278 10 32889965 32890867 Sto10g2278 10 32889965 32890867 ECH