Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2276 ATGGCTACCCTCAAACACCCATCACTCCTTCTCTTCCCTCTCCTTCTCATCTCCCTCTTCATCCCATCCTCCCATGGCGCCGGCGCCATCGCCGTCTACTGGGGCCAAGACGGCCGCGAAGGCACCTTAGCCGACGCCTGCAACACCGGAAACTACCAATTCATCAACATAGCTTTCCTCTCCACCTTCGGCGGCGGCCGAACCCCACAACTCAACCTCGCCGGCCACTGCGAGCCCGCCAACAACAACGGCTGCTCCGTCCAGAGCACCGATATCAAGGCCTGCCAAGACAAAGGAATCAAAGTCCTCCTCTCCCTCGGAGGTCACAGCGAGACCGAAACCTACTCCCTCAACTCGGCCGACGAGGCGACCGGCCTCGCCGACTACATCTGGAACAACTTCCTCGGCGGAACCTCGGACTCTCGGCCTCTCGGCGACGCCGTGTTGGACGGCGTCGACTTCGACATCGAGATGGGTACAGGGCTATACTGGGACGACCTCGCTAGGGCTTTGAATTCGTACAGCAGCCAGAAAAAAGTGTATTTAGCGGCGGCTCCACAGTGTCCCCACCCTGATGCTAATTTAAACACTGCGATCAATACGGGGCTTTTCGATTATGTGTGGGTGCAATTCTATAATAACCCTCAATGTCAATACAGTGACGGGAATATTGACAATCTTCTGAGTGCATGGAACCAATGGACTTCGTCACCGGCTAACCAGGTTTTCTTGGGGCTGCCGGCGTCTTCCGAGGCTGCTCCGAGCGGCGGCTTTATCCCGGCGGATGCGTTGATATCGCAGGTTCTTCCGGCGATCAAGAGTTCTAGTAATAATAAGTACGGTGGGGTGATGCTATGGAATAGTGACTATtga 873 0.5578 MATLKHPSLLLFPLLLISLFIPSSHGAGAIAVYWGQDGREGTLADACNTGNYQFINIAFLSTFGGGRTPQLNLAGHCEPANNNGCSVQSTDIKACQDKGIKVLLSLGGHSETETYSLNSADEATGLADYIWNNFLGGTSDSRPLGDAVLDGVDFDIEMGTGLYWDDLARALNSYSSQKKVYLAAAPQCPHPDANLNTAINTGLFDYVWVQFYNNPQCQYSDGNIDNLLSAWNQWTSSPANQVFLGLPASSEAAPSGGFIPADALISQVLPAIKSSSNNKYGGVMLWNSDY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2276 290 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 149 157 IPR001579 GO:0004553|GO:0005975
Sto10g2276 290 Pfam Glycosyl hydrolases family 18 30 264 IPR001223 GO:0005975
Sto10g2276 290 PANTHER ENDOCHITINASE 15 290 - -
Sto10g2276 290 Gene3D Glycosidases 28 290 - -
Sto10g2276 290 PANTHER ACIDIC ENDOCHITINASE 15 290 - -
Sto10g2276 290 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 290 IPR001223 GO:0005975
Sto10g2276 290 CDD GH18_hevamine_XipI_class_III 28 287 IPR045321 -
Sto10g2276 290 SUPERFAMILY (Trans)glycosidases 27 289 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2276 Sto-Chr10 32880042 32881028 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2276 1 288 Glycoside Hydrolase AT5G24090 55.862 5.24e-111 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2276 K01183 - gmx:100783329 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2276 10 32880042 32881028 Sto10g2276 10 32880042 32881028 ECH