Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2239 ATGACGGACGGCTACTGGAATCGACAGCAGGCGCTTCTCCCCTCTTCCGCCATGCTCAAACGACCTCGTACTGACTACGAAATGCAAGCTTCTGGTCTGGCTTCAGGTAACGAGATGCATGGTTATATTGCTCGAGATGATGACCGTGCTGGTTCTCTTGTTATAAAAGACACAAATTCAATTGGGTCTGCTTATGACCGCTATCTTCAGAGTGCGCAACTATCTTCATATAACTCTGGAGAAGCCAGTACAATTGGTGGTGTTGGATTGGGGAGAGCTGTTGTTGGTGGAATTCCTAATCATTCACTGCCTGATCCTGCTGTCATGAGACGCCATGGGAGTGGTGGTCCTGATCTTGCACCAAATGGACGGAATGTTAATTTTGGTGGTCAGCTACCAATGGATGCAGTTTCGAGGCCTGGACCTGAGACAGTACCTTTACCACCAGATGCTTCAAGTACTTTATATGTTGAAGGTCTCCCTTCTGACAGCACAAGAAGAGAAGTGGCTCTTCAGTTATTCATTTTCCTTAATATCGCTTTAGATATCTTCCGCCCTTTTGTTGGATACAGAGAAGTAAGACTTGTCAGTAAAGAGTCCAAAACTcgtagtggtgatcCTCTTATCCTTTGTTTTGTGGATTTTGCAAATCCAGCTTGTGCAGCAACTGCTTTGAGTGCCTTGCAAGGTTATAAAGTTGACGAACTCAACCCCGAGTCGAATCACTTGCGGCTTCAATTTTCTCGGTTTCCTGGACCAAGAACTGGACCTGGATCTCGTGGTAAGAGGTGA 792 0.452 MTDGYWNRQQALLPSSAMLKRPRTDYEMQASGLASGNEMHGYIARDDDRAGSLVIKDTNSIGSAYDRYLQSAQLSSYNSGEASTIGGVGLGRAVVGGIPNHSLPDPAVMRRHGSGGPDLAPNGRNVNFGGQLPMDAVSRPGPETVPLPPDASSTLYVEGLPSDSTRREVALQLFIFLNIALDIFRPFVGYREVRLVSKESKTRSGDPLILCFVDFANPACAATALSALQGYKVDELNPESNHLRLQFSRFPGPRTGPGSRGKR 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2239 263 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 182 234 IPR000504 GO:0003723
Sto10g2239 263 SUPERFAMILY RNA-binding domain, RBD 128 258 IPR035979 GO:0003676
Sto10g2239 263 CDD RRM_RBPMS_like 153 246 - -
Sto10g2239 263 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 153 250 IPR000504 GO:0003723
Sto10g2239 263 PANTHER RNA-BINDING PROTEIN 2 6 263 - -
Sto10g2239 263 Gene3D - 149 250 IPR012677 -
Sto10g2239 263 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 6 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2239 Sto-Chr10 32442328 32456991 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2239 - - gmx:100813445 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2239 10 32442328 32456991 Sto10g2239 10 32442328 32456991 ECH