Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1752 ATGTGGTTTCCCAAGAAGATGATCTTCCTCCTGGTTTCATGGTGGTTCATATGTGTTGTTTTTGTCCATTCGAATATACAGAATCATTACGATTTTGTTGTGAGAGAAGCTCAATACACAAGACTCTGCTCCACAAAGAGCATATTGACTGTGAATGGAGAATTTCCAGGGCCAACTATTAGAGCTGAAATGGGTGAAACAGTCTATGTCAATGTCCATAACAAGGGCAGATACAACATCACATTACACTGGCATGGACTGAAGCAGCCAAGGAATCCATGGACAGATGGCCCTGAGTACATCACTCAGTGCCCTATAAAACCTGGAGAGAAGTTCAGGCAGAAATTGATTTTCTCTACAGAGGAAGGAACCTTATGGTGGCATGCTCACAGCGATTGGTCACGAGCTACAGTCCATGGAATCATCATAGTCTACCCGCACAAGAATAGTGACTATCCTTTTCCCACACCTGATGCAGAGATCCCCATTATTTTTGGAGAATGGTGGAAGGATGATGTGAAAAAGGTTTTGACAGAGTTCATTGAATCCGGAGGATCTCCTAGAAATTCTGATGCTATCACCATAAATGGTCAACCAGGGGACCTTTATCCATGCTCAAAATCAGAAACATTCAAGTTAAATGTGGACCAAGGGAAGACTTACCTTCTTCGTATGGTTAATGCTGCAATGAACCTCATTCTGTTCGTCTCAATTTCAAATCACGAGCTCACCGTTGTTGGTGCAGATGGCAGCTATACAAAGCCACTGACAAGAGATTACATCACTATAACTCCAGGACAAACAATGGATGTTCTGTTATATGCCAACCAAGAGCCCTATCACTACTATATGGCTGCAAGAGCATATTCATCAAGTGCTGCAATTCCCTTTGATAATACAACCACCACTGCTATTCTCCAATACAGGGGGTATTACTACTATCCATCAACTCTTTCATTGCCTTACCTTCCTTACTACAATGACACACAAGCAGCTTTCAACTTCTTCAGTAGCTTAAAGGGATTGCCTGAGAAATACCCTCACAAAATCCCATTACAAGTCAACACTCACATACTGACCACTCTTTCTATAAACGCACTTCCTTGCCAGAGAGGCCAATTGTGTGAAGGACCAAACGATACCCGTTTAGTTTCTAGCATGAACAACATAAGTTTTGAGACACCAAGCATTGACATACTAGAAGCATATTACTACCATATTAAGGGAGTGTTTGGCAGGGGATTTCCGAGGTTTCCACCATTGTTGTTTAACTTCACTGCTGAGTATCTTCCTCTGGTTCTGGAGATTCCGAAGCGAGGGACGGAGGTTAAGGTTCTCAAGTATGGTGTAAGTGTGGAGGTTGTTTTCCAGGGGACGAATTTGGTTGCAGGGATAGACCATCCTATGCATCTCCATGGATTTAGTTTCTTTGTTGTTGGATATGGGTTGGGGAATTTCAACAAACACTTGGACTACAAGAGTTTCAATCTTGTTGATCCTCCTCTTATGAACACTGTCTTTGTGCCCACAAATGGCTGGGCTGCTATCAGGTTCAAGGCTACCAATCCAGGAGTATGGTTCCTGCACTGCCACTTAGAGCGCCATCTGTCTTGGGGAATGGAGACAGTGTTCATTGTGAAGAATGGAGAAGGGTTATATGAAACAATACTGCCTCCACCACCAGATATGCCACCATGTTGA 1701 0.4309 MWFPKKMIFLLVSWWFICVVFVHSNIQNHYDFVVREAQYTRLCSTKSILTVNGEFPGPTIRAEMGETVYVNVHNKGRYNITLHWHGLKQPRNPWTDGPEYITQCPIKPGEKFRQKLIFSTEEGTLWWHAHSDWSRATVHGIIIVYPHKNSDYPFPTPDAEIPIIFGEWWKDDVKKVLTEFIESGGSPRNSDAITINGQPGDLYPCSKSETFKLNVDQGKTYLLRMVNAAMNLILFVSISNHELTVVGADGSYTKPLTRDYITITPGQTMDVLLYANQEPYHYYMAARAYSSSAAIPFDNTTTTAILQYRGYYYYPSTLSLPYLPYYNDTQAAFNFFSSLKGLPEKYPHKIPLQVNTHILTTLSINALPCQRGQLCEGPNDTRLVSSMNNISFETPSIDILEAYYYHIKGVFGRGFPRFPPLLFNFTAEYLPLVLEIPKRGTEVKVLKYGVSVEVVFQGTNLVAGIDHPMHLHGFSFFVVGYGLGNFNKHLDYKSFNLVDPPLMNTVFVPTNGWAAIRFKATNPGVWFLHCHLERHLSWGMETVFIVKNGEGLYETILPPPPDMPPC 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1752 566 CDD CuRO_3_LCC_plant 410 549 IPR034289 GO:0005507
Sto10g1752 566 Gene3D - 157 342 IPR008972 -
Sto10g1752 566 SUPERFAMILY Cupredoxins 20 171 IPR008972 -
Sto10g1752 566 PANTHER MULTI-COPPER OXIDASE 33 566 IPR045087 -
Sto10g1752 566 Pfam Multicopper oxidase 161 310 IPR001117 -
Sto10g1752 566 CDD CuRO_2_LCC_plant 161 308 IPR034285 -
Sto10g1752 566 Pfam Multicopper oxidase 34 148 IPR011707 GO:0005507
Sto10g1752 566 Pfam Multicopper oxidase 438 549 IPR011706 GO:0005507|GO:0016491
Sto10g1752 566 CDD CuRO_1_LCC_plant 30 146 IPR034288 GO:0005507
Sto10g1752 566 SUPERFAMILY Cupredoxins 154 341 IPR008972 -
Sto10g1752 566 Gene3D - 19 146 IPR008972 -
Sto10g1752 566 PANTHER LACCASE-15 33 566 - -
Sto10g1752 566 ProSitePatterns Multicopper oxidases signature 1. 524 544 IPR033138 -
Sto10g1752 566 Gene3D - 374 566 IPR008972 -
Sto10g1752 566 SUPERFAMILY Cupredoxins 377 566 IPR008972 -
Sto10g1752 566 TIGRFAM laccase: laccase 28 566 IPR017761 GO:0046274|GO:0048046|GO:0052716
Sto10g1752 566 ProSitePatterns Multicopper oxidases signature 2. 529 540 IPR002355 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1752 Sto-Chr10 27056667 27062829 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1752 K05909 K19791 gmx:100817468 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g1752 10 27056667 27062829 Sto10g1752 10 27056667 27062829 ECH