Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0485 ATGGTGATAGGGTGGGGAATTTTGGTGATGATTGGAGTAATTGTTGCAAGGTACTTGAGAAGATTCCCATTGCAGTGTGATGAATGGTACTCTTTTCACACAGTTTGTCAAACTGTGGGTTACATTCTGGGCACAGTGGGATGGTGCTTCAGCATGTGGTTCAATGCAACTTCCTCATCAAAACTATCTGCTTCCTCTAAAACTCTCACTACCATTGCTTTCGCTTTCTTAAACCTTCAAGTAAGTTCAATCACGAACCTTTTTATATTTATGGCCACGTCAGCCGCCATGGACGGCGTCGCTGCGGCGTCGCTCCGGTCAGTTCTGCAACGCGTTCAACTAGCCGCCGAGCGATCAGGCCGTGCGGCTCAACAGATCCGAGTCGTCGCCGTCAGTAAGACTAAGCCAGTTTCCGTCCTTCGTGAGGTCTACGATGCTGGCCATCGATGCTTCGGCGAAAACTACGTTCAGGAACTCGTTGAGAAAGCTCCTCAGCTTCCGGAAGATATTAAGTGGCATTTCATTGGGAATTTGCAGAGCAATAAAGTAAAGCCTCTTCTGGGTATACGAGGTGCTTTTGGAGTCATAGTTGGTTGGAATGATATGATCATTGTCCAAGATCAGTTTTACATGAACTTTGGAAGTGGTATGATTAGAAAGCAATATGGATTGCTTCTTGTTTGTACTAGTACTATTGCAAATCGTCTTGATCGTGCCGTGGCAAACATTGGGAGAAAGCCTTTGAAGATTTTTGTCCAAGTGAATACAAGTGGAGAAATATCAAAATCTGGTGTTGATCCTGCTGGTTGTGTGGACCTCGTAAAACATATTAGGAACTGCCCAAACCTTGAGTTTTGTGGCCTAATGACAATTGGTATGCTGGATTATTCATCCACCCCTGAAAATTTTCAGATGCTATCTAATTGTAAGAGTGAAGTTTGCAAGGCCTTTGCAATATCAGAAGAGCAATGCGAGCTCTCAATGGGCATGTCTGCAGATTTTGAGCAAGCTATTGAGATGGGAAGCACAAATGTGAGGATAGGATCTACCATATTTGGGGCCAGAGAATATCCAAAGAAGCAAAATCACTAG 1092 0.4423 MVIGWGILVMIGVIVARYLRRFPLQCDEWYSFHTVCQTVGYILGTVGWCFSMWFNATSSSKLSASSKTLTTIAFAFLNLQVSSITNLFIFMATSAAMDGVAAASLRSVLQRVQLAAERSGRAAQQIRVVAVSKTKPVSVLREVYDAGHRCFGENYVQELVEKAPQLPEDIKWHFIGNLQSNKVKPLLGIRGAFGVIVGWNDMIIVQDQFYMNFGSGMIRKQYGLLLVCTSTIANRLDRAVANIGRKPLKIFVQVNTSGEISKSGVDPAGCVDLVKHIRNCPNLEFCGLMTIGMLDYSSTPENFQMLSNCKSEVCKAFAISEEQCELSMGMSADFEQAIEMGSTNVRIGSTIFGAREYPKKQNH 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0485 363 Hamap Pyridoxal phosphate homeostasis protein. 103 354 IPR011078 GO:0030170
Sto10g0485 363 Gene3D Alanine racemase 106 354 IPR029066 -
Sto10g0485 363 Gene3D - 1 105 - -
Sto10g0485 363 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 230 360 IPR011078 GO:0030170
Sto10g0485 363 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 95 190 IPR011078 GO:0030170
Sto10g0485 363 CDD PLPDE_III_YBL036c_euk 105 353 - -
Sto10g0485 363 PANTHER PYRIDOXAL PHOSPHATE HOMEOSTASIS PROTEIN 230 360 - -
Sto10g0485 363 PANTHER PYRIDOXAL PHOSPHATE HOMEOSTASIS PROTEIN 95 190 - -
Sto10g0485 363 ProSitePatterns Uncharacterized protein family UPF0001 signature. 172 186 IPR011078 GO:0030170
Sto10g0485 363 SUPERFAMILY PLP-binding barrel 106 360 IPR029066 -
Sto10g0485 363 Pfam Alanine racemase, N-terminal domain 111 355 IPR001608 -
Sto10g0485 363 TIGRFAM TIGR00044: pyridoxal phosphate enzyme, YggS family 231 355 IPR011078 GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0485 Sto-Chr10 3941180 3947618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0485 K06997 - rcu:8277985 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0485 10 3941180 3947618 Sto10g0485 10 3941180 3947618 ECH