Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0482 ATGGGAAAGATGTGGAAGGCATTTGTATTGTGGGCCTTGTTGGTTAGTGTGGCATCGTCCATGGAAGATAATGGGCTTCGCAGAATTGGGCTGAAAAAGATGAAATTGGGCCTGGGCAACCTGGCTTACATGAGAAGGAACCTCCATAGGAAGTTAGGAAAGGCCGAGAACTCTGATGATATTATTGGGCTGAAGAATTACTTTGATGCCCAGTACTATGGTGAAATTGCCATTGGTACCCCTCCTCAGAAATTCAAGGTCATTTTTGACACTGGAAGCTCCAATATGTGGGTCCCATCATCTCAGTGTTTTTCCTCGTTTGCATGTTACTTGCATGCCAAGTACAGATCTAGCCAATCAAGTACTTATAGACAAAACGGGACTTCTGCTGCAATTCAATATGGTAGTGGAGCTATTTCTGGTTTCTTTAGCTACGACAATGTTCAAGTTGGTGATATAGTTGTAAAGAACCAAATATTTATTGAAGCAACTAATGAGCCTGGAACCACATTTATGATGGCCAAGTTTGATGGTATACTAGGTTTGGGTTTCCAAGAGATTTCAGTTGAAAACGCTGTGCCTGTTTGGTACAATATGATAGATCAAGGTCATATTGAGCCAATATTCTCATTTTGGCTAAACCGAAACCAATCAGATGCAAAAGGTGGTGAGATTGTGTTTGGTGGTGTTGATACTGCTCACTTCAAGGGCCAGCACACTTTTGTGCCCGTTACACGCAAAGGCTATTGgcagTTTGATATGGGGGATATATTAATTGGTGGGAAACCAATTGGATATTGTAATGGTGGCTGTTCAGCAATTGCAGATTCAGGAACTTCTTTGTTGACTGGTCCAACGCCTGCAATTAATGCCATAAATCAAGCAATTGGAGCCCATGGAGATGGATTTAGTAGCCAAGAATGCAAGGCAGTTGTTGCACAGTATGGACCAACAATCCTAAACTTGCTTATAGCTCAAGCAGAGCCAAAGAAGATATGTTCCCAAATTGGATTGTGCATGTTTGATGGAAGTCATGGAGTAAGCGCGGGTATTGAGAGTGTGGTGGATGAGAGCGAAGCAAAATCCTCTGCTTGTTCTGCTTGTGAGAAGATGGTGGTTTTGATGCAAAATCAAACACAAGATGGCATATTAAACAATGTTAGTGAGgtTTGTGACAAAATGGAGAGGTCAGTGGGAGAATCAACTGTGGACTGTGATAAGATCCCTACAATGCCTATTGTTTCATTCACTATTGGGGGGAAAAATTTTGACCTTTCTCCCCAGGAGTACGTACTGAAGATAGGGGAAGGCTCTGAAGCTCAATGCATTAGTGGATTCACTTCTTTGGATGTTCCTCCTCCTCGTGGTCCTATCTGGTAA 1380 0.4217 MGKMWKAFVLWALLVSVASSMEDNGLRRIGLKKMKLGLGNLAYMRRNLHRKLGKAENSDDIIGLKNYFDAQYYGEIAIGTPPQKFKVIFDTGSSNMWVPSSQCFSSFACYLHAKYRSSQSSTYRQNGTSAAIQYGSGAISGFFSYDNVQVGDIVVKNQIFIEATNEPGTTFMMAKFDGILGLGFQEISVENAVPVWYNMIDQGHIEPIFSFWLNRNQSDAKGGEIVFGGVDTAHFKGQHTFVPVTRKGYWQFDMGDILIGGKPIGYCNGGCSAIADSGTSLLTGPTPAINAINQAIGAHGDGFSSQECKAVVAQYGPTILNLLIAQAEPKKICSQIGLCMFDGSHGVSAGIESVVDESEAKSSACSACEKMVVLMQNQTQDGILNNVSEVCDKMERSVGESTVDCDKIPTMPIVSFTIGGKNFDLSPQEYVLKIGEGSEAQCISGFTSLDVPPPRGPIW 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0482 459 ProSiteProfiles Peptidase family A1 domain profile. 72 459 IPR033121 -
Sto10g0482 459 Gene3D Acid Proteases 27 229 IPR021109 -
Sto10g0482 459 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 7 459 IPR001461 GO:0004190|GO:0006508
Sto10g0482 459 SUPERFAMILY Acid proteases 7 459 IPR021109 -
Sto10g0482 459 SUPERFAMILY Saposin 305 394 IPR011001 -
Sto10g0482 459 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 273 284 IPR001969 GO:0004190|GO:0006508
Sto10g0482 459 Gene3D - 303 395 - -
Sto10g0482 459 ProSiteProfiles Saposin B type domain profile. 303 343 IPR008139 -
Sto10g0482 459 PRINTS Pepsin (A1) aspartic protease family signature 78 98 IPR001461 GO:0004190|GO:0006508
Sto10g0482 459 PRINTS Pepsin (A1) aspartic protease family signature 223 236 IPR001461 GO:0004190|GO:0006508
Sto10g0482 459 PRINTS Pepsin (A1) aspartic protease family signature 273 284 IPR001461 GO:0004190|GO:0006508
Sto10g0482 459 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 7 459 - -
Sto10g0482 459 Pfam Saposin-like type B, region 2 306 339 IPR008138 -
Sto10g0482 459 Pfam Eukaryotic aspartyl protease 71 459 IPR033121 -
Sto10g0482 459 Gene3D Acid Proteases 230 459 IPR021109 -
Sto10g0482 459 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 87 98 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0482 Sto-Chr10 3911535 3915866 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0482 K08245 - gmx:547943 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0482 10 3911535 3915866 Sto10g0482 10 3911535 3915866 ECH