Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0474 ATGTGGGGAATCATCAGGAGGAAAGTGGCTACTGGAGATCTAACTGATGCTGTTGTGCCCTTTATGGGGGAATCCATTACTGATGGCACTCTTGCAAAGTTTTTAAAGAAACCTGGTGATCGTGTAGAACTTGATGAGCCAATTGCCCAAATAGAAACAGACAAGGTGACCATTGATGTAAACAGTCCGGAGGCAGGCATAATTCAGAAACTTGTTGCAAGAGAAGGTGATGTTGTTCAGCCTGGTCATAAGGTAGCTGTAATTTCTAAATCTGGTGAAGGTGTGACACATGTTGCTCCTTCTGAAAAAGCAACCCCTGAGCCATCTcaagtagaaaagaaaaaggtagCTGAGGAAAGTCCAAAGGCCAcgtctcctcctcctcctcctaagGAATCACCCAAAGCTCCATCTGTGACAGCACAACCCTCTAAATCCCCAGTAAAAGAACCTCAACTTCCCcccaaagaaaaggaaagaagaGTTCCTATGACAAGACTCAGGAAACGTGTGGCAACACGCTTGAAAGATGCACAGAACACTTTTGCCATGCTCACTACATTTAATGAAGTTGATATGACTAATTTAATGAAGCTCCGATCTGATTACAAGGATGTTTTTGTTGAGAAGCATGGTGTGAAGTTAGGACTCATGTCTGGATTTATTAAGGCTGCTGTAAGTGCACTCCAGCATCAGCCAATTGTCAACGGTGTCATTGATGGAGATGACATCATTTATAGAGACTATATTGACATCAGTATTGCAGTTGGCACAAAAAAGGGTCTTGTTGTTCCGGTTTTACGCAATGCTGAGCAAATGAATTTCGCGGAGATTGAGAAACAAATCAACACCCTTGCCAAAAAGGCAAATGACGGTACCATATCAATTGATGAAATGGCTGGAGGTACATTCACCATATCAAATGGTGGCGTTTATGGAAGCCTTTTAAGTACCCCAATAATCAATCCCCCTCAGTCAGCGATCCTCGGCATGCACTCAATAGTGAATCGTCCGATGGTAGTAGGTGGTCAAGTTGTAGCAAGGCCAATGATGTACATTGCTCTAACATATGATCATCGACTAATTGATGGTAGAGAGGCAGTCTATTTCTTGCGTCGTATCAAAGATGTCGTGGAGGATCCTCGGAGGCTGCTGCTTGATGTATGA 1167 0.4096 MWGIIRRKVATGDLTDAVVPFMGESITDGTLAKFLKKPGDRVELDEPIAQIETDKVTIDVNSPEAGIIQKLVAREGDVVQPGHKVAVISKSGEGVTHVAPSEKATPEPSQVEKKKVAEESPKATSPPPPPKESPKAPSVTAQPSKSPVKEPQLPPKEKERRVPMTRLRKRVATRLKDAQNTFAMLTTFNEVDMTNLMKLRSDYKDVFVEKHGVKLGLMSGFIKAAVSALQHQPIVNGVIDGDDIIYRDYIDISIAVGTKKGLVVPVLRNAEQMNFAEIEKQINTLAKKANDGTISIDEMAGGTFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMVVGGQVVARPMMYIALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLLDV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0474 388 Pfam Biotin-requiring enzyme 19 88 IPR000089 -
Sto10g0474 388 SUPERFAMILY Single hybrid motif 15 106 IPR011053 -
Sto10g0474 388 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 39 68 IPR003016 -
Sto10g0474 388 Gene3D - 15 91 - -
Sto10g0474 388 Gene3D - 143 384 IPR023213 -
Sto10g0474 388 MobiDBLite consensus disorder prediction 90 165 - -
Sto10g0474 388 SUPERFAMILY CoA-dependent acyltransferases 158 387 - -
Sto10g0474 388 TIGRFAM sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 137 388 IPR006255 GO:0004149|GO:0006099|GO:0045252
Sto10g0474 388 MobiDBLite consensus disorder prediction 151 165 - -
Sto10g0474 388 ProSiteProfiles Biotinyl/lipoyl domain profile. 14 89 IPR000089 -
Sto10g0474 388 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 10 388 - -
Sto10g0474 388 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX 1, MITOCHONDRIAL-RELATED 10 388 - -
Sto10g0474 388 MobiDBLite consensus disorder prediction 122 136 - -
Sto10g0474 388 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 157 386 IPR001078 GO:0016746
Sto10g0474 388 CDD lipoyl_domain 15 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0474 Sto-Chr10 3853783 3857308 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0474 19 386 Acyl Lipid Metabolism Gene Families AT1G54220 28.972 1.54e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0474 K00658 - vvi:100244395 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0474 10 3853783 3857308 Sto10g0474 10 3853783 3857308 ECH