Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0391 ATGCTTTCCTCTTATGCACCAGTCATCTCTGCAGAAAAGGCTTACCACGAGCAACTTTCAGTGGCCGAAATCACCAACAGTGCATTTGAGCCCTCTTCTATGATGGCCAAGTGTGACCCTCGTCACGGCAAGTACATGGCATGTTGTCTCATGTACCGTGGCGATGTCGTGCCCAAAGATGTTAATGCTGCCGTTGGTACCATCAAGACTAAGAGGACGATTCAGTTCGTTGATTGGTGCCCCACTGGTTTCAAGTGTGGTATTAACTACCAACCACCTACCGTTGTTCCTGGTGGTGACCTTGCGAAGGTTCAGAGGGCAGTGTGCATGATCTCAAACTCTACTAGTGTTGCTGAGGTGTTCTCTCGCATTGACCATAAGTTTGATCTCATGTATTCTAAGAGGGCTTTTGTGCACTGGTATGTGGGTGAGGGTATGGAAGAAGGGGAATTCTCTGAAGCTCGTGAGGATCTTGCTGCCCTTGAGAAGGATTATGAGGAGGTGGGTGCCGAGTCTGCTGAGGGTGAGGATGACGATGGGGAGGAGTACTAG 552 0.4964 MLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEDDDGEEY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0391 183 PRINTS Alpha-tubulin signature 7 22 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Sto10g0391 183 PRINTS Alpha-tubulin signature 54 75 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Sto10g0391 183 PRINTS Alpha-tubulin signature 80 93 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Sto10g0391 183 PRINTS Alpha-tubulin signature 93 112 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Sto10g0391 183 PRINTS Alpha-tubulin signature 118 134 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Sto10g0391 183 PRINTS Alpha-tubulin signature 155 171 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Sto10g0391 183 Gene3D Helix hairpin bin 117 169 IPR023123 -
Sto10g0391 183 SUPERFAMILY Tubulin C-terminal domain-like 2 169 IPR008280 -
Sto10g0391 183 Gene3D - 2 116 IPR037103 -
Sto10g0391 183 PANTHER TUBULIN ALPHA-6 CHAIN 1 182 - -
Sto10g0391 183 SMART Tubulin_C_4 1 126 IPR018316 -
Sto10g0391 183 Coils Coil 151 171 - -
Sto10g0391 183 PANTHER TUBULIN 1 182 IPR000217 GO:0005874|GO:0007017
Sto10g0391 183 Pfam Tubulin C-terminal domain 2 125 IPR018316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0391 Sto-Chr10 3147182 3147733 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0391 K07374 - dct:110098014 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0391 10 3147182 3147733 Sto10g0391 10 3147182 3147733 ECH