Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0373 TTGGTGGAACCAAAAAGGGCTCAGTATGGAGGGGGCATTATAGTAAATCCAGGGTTTGATCAAAGGCTAGAAGGTTGGACAGTAAGTGGGAAAGGAGGTATTGAAGTGAGATCATCAAAGGAAGGAAATAGATTTATTGTTGCAAAAAACAGAACACACCCATTACATAGTTTCTCCCAGAAGATACAGCTTTTGAAAGGAAGGCTATACACCTTTTCTGCTTGGGTTCAAGTGAGTGAAGGAAGAGAGACAGTGTCAGTTATATTTAGAAGTAATGGAAGTGAAGTGAGTAGAGGTGGGCATGTGACAGCACAACATGGATGCTGGACTATGCTTAAAGGTGGCATAGTTGCAAATTTCTCTACCTCTGCTCATATTCTTTTTGAGAGTGAGAATAGTGAAGTGGAATTATGGGTTGATAGTGTCTCATTGCAACCATTCACCAAAAAGCAGTGGAGATCACACCAAGACTATAGCATTGAGAGGATTCGTAAGCGCAAGATCAGATTCCAACTAACACACACAAATGAAACAACATCATTGGAAGGAGCTATAGTCTACATCAATGGAACAAGATCAAGCTTTCCCTTTGGCTGTGGTATGAACTTGAACATTCTCACAAGCAAAGAATACCAAACATGGTTTGCATCAAGGTTCAAATACACAACTTTCACCAATTCCATGAAATGGTACAGCACAGAAATAAAGCCAGGTGAGGAAAACTACAACATAGCAGATTCCATGATGGCATTCACAAAACAGAACAACATTTGTGTCAGAGGCCACAATGTTTTATGGGACGCTCCAGATAAACAGACACAATGGGTGAAATCTCTGTCTTCTGAGGAACTCAGAAAAGCAGTAGAAAAAAGAGTGAATTCTGTGGTTTCAAGATATAGAGGTCAACTTATTGCCTGGGATGTGATGAATGAGAATCTGCATTTCAGCTTTTTTGAGGATAAGTTGGGTAAAAATGCTTCTGCTGAGTATTACTCTATGTCTTACAAGATTGATCCAAAGACAGTAATGTTCATGAATGAGTATAATGCTATTGAGTATAGTGGGGATAAGAAAGTGACCCCAGAGAAGTACAAGAAGAAACTTGAGGAGATTAGGTCATTTCCAGGAAGTGAAGGGATGTTAGTAGGAATTGGGTTGCAAGGTCATTTTACTGCTGGCCAGCCTAATGTTGCTTACATGAGATCTGTTTTGGATGCTCTTAGCAATTTGGGACTACCCATATGGCTTACTGAAGTCAGTGTTGATAAAGACCCAAATCAGGCACAGTACTTGGAGGAGATTCTAAGGGAAGGATACTCTCATCCTGGTGTTGAAGGGATTATAACATTTAGTGGTCCAATAATTGCTGGTTTCAAAGATATGCCTCTTGCCGATGAAAATTTCCACAATACTCCTGCTGGAGACGTTGTGGACAAGCTTCTAAAAGAGTGGAAATCTGAGCCTATGAAAGCACAAGCAGATAGCAATGGTTTTGTGGATGTTTCACTATTCCATGGAGATTATGATTGCTTGAAGGAACCAAAAAGGGCACAGTATGGAGGGGGCATTATAGTAAATCCAGGGTTTGATCAAAGGCTTGAGGGTTGGAAAGTTAGTGGGAAAGGAGGTATTGAAGTGAGATCATCAAAGGAAGGAAATAGATTTATTGTTGCAAAAAACAGAACACACCCATTACATAGTTTCTCACAGAAGATACAGCTTTTGAAAGGAAGGCTATACACCTTTTCTGCTTGGGTTCAAGTGAGTGAAGGAAGAGAGACAGTGTCAGTTATATTTAGAAGTAATGGAAGTGAAGTGAGTAGAGGTGGGCATGTGACAGCACAACATGGATGCTGGACTATGCTTAAAGGTGGCATAGTTGCAAATTTCTCTACCTCTGCTCATATTCTTTTTGAGAGTGAGAATAGTGAAGTGGAATTATGGGTTGATAATGTCTCACTGCAACCATTCACCAAAAAGCAGTGGAGATCACACCAAGACTATAGCATTGAGAGGATTCGAAAGCGCAAGGTCAGATTCCAAATAAGTCACACAAACGAAACAGCATTGGATAAAGCTGTAGTCTACATCAATGGAGCAAGATCAAGCTTTCCATTTGGGTGTGGTATGAACTTGAACATTCTCACAAGCAAAGAATACCAAACATGGTTTGTGTCAAGATTCAAATACACAACTTTCACCAATTCCATGAAATGGTACAGCACAGAAATAAAGCAAGGTCAAGAAAACTACACTATAGCAGATTCCATGATGGCATTCACAAAACAGAACAACATTCGTGCAGAGTACTTGGAGGAGATTCTAAAGGAAGGATACTCTCATCCTGCTGTTGAAGGGATTATAACATTTGGTGGTCCAATAACTGCTGGTTTCAAAGATATGCCTCTTGCCGATGAAAATTTCCACAATACTCCTGCTGGAGACGTTGTGGACAAGCTTCTAAAAGAGTGGAAATCTGGGCCTATGAAAGCACAAGCAGATAGCAACGGTTTTGTGGATGTTTCACTATTCCATGGAGATTATGATGTTACTGTAGTGCATCCTATAACTAAATCCTCCATAACGCAGAAACTTAGTGTACACAAGGATGCTCCACAAGAAACTGTTCAACTCAAAATTCATGCCTAG 2649 0.402 LVEPKRAQYGGGIIVNPGFDQRLEGWTVSGKGGIEVRSSKEGNRFIVAKNRTHPLHSFSQKIQLLKGRLYTFSAWVQVSEGRETVSVIFRSNGSEVSRGGHVTAQHGCWTMLKGGIVANFSTSAHILFESENSEVELWVDSVSLQPFTKKQWRSHQDYSIERIRKRKIRFQLTHTNETTSLEGAIVYINGTRSSFPFGCGMNLNILTSKEYQTWFASRFKYTTFTNSMKWYSTEIKPGEENYNIADSMMAFTKQNNICVRGHNVLWDAPDKQTQWVKSLSSEELRKAVEKRVNSVVSRYRGQLIAWDVMNENLHFSFFEDKLGKNASAEYYSMSYKIDPKTVMFMNEYNAIEYSGDKKVTPEKYKKKLEEIRSFPGSEGMLVGIGLQGHFTAGQPNVAYMRSVLDALSNLGLPIWLTEVSVDKDPNQAQYLEEILREGYSHPGVEGIITFSGPIIAGFKDMPLADENFHNTPAGDVVDKLLKEWKSEPMKAQADSNGFVDVSLFHGDYDCLKEPKRAQYGGGIIVNPGFDQRLEGWKVSGKGGIEVRSSKEGNRFIVAKNRTHPLHSFSQKIQLLKGRLYTFSAWVQVSEGRETVSVIFRSNGSEVSRGGHVTAQHGCWTMLKGGIVANFSTSAHILFESENSEVELWVDNVSLQPFTKKQWRSHQDYSIERIRKRKVRFQISHTNETALDKAVVYINGARSSFPFGCGMNLNILTSKEYQTWFVSRFKYTTFTNSMKWYSTEIKQGQENYTIADSMMAFTKQNNIRAEYLEEILKEGYSHPAVEGIITFGGPITAGFKDMPLADENFHNTPAGDVVDKLLKEWKSGPMKAQADSNGFVDVSLFHGDYDVTVVHPITKSSITQKLSVHKDAPQETVQLKIHA 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0373 882 SMART glyco_10 228 481 IPR001000 GO:0004553|GO:0005975
Sto10g0373 882 Pfam Glycosyl hydrolase family 10 701 767 IPR001000 GO:0004553|GO:0005975
Sto10g0373 882 Pfam Glycosyl hydrolase family 10 193 428 IPR001000 GO:0004553|GO:0005975
Sto10g0373 882 SUPERFAMILY (Trans)glycosidases 767 828 IPR017853 -
Sto10g0373 882 SUPERFAMILY (Trans)glycosidases 695 767 IPR017853 -
Sto10g0373 882 Gene3D Glycosidases 691 771 - -
Sto10g0373 882 Pfam Carbohydrate binding domain 522 625 IPR003305 GO:0016798
Sto10g0373 882 Pfam Carbohydrate binding domain 12 115 IPR003305 GO:0016798
Sto10g0373 882 Gene3D Glycosidases 188 492 - -
Sto10g0373 882 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 509 766 - -
Sto10g0373 882 Gene3D - 511 657 - -
Sto10g0373 882 Gene3D - 2 147 - -
Sto10g0373 882 SUPERFAMILY (Trans)glycosidases 187 487 IPR017853 -
Sto10g0373 882 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 189 480 IPR001000 GO:0004553|GO:0005975
Sto10g0373 882 SUPERFAMILY Galactose-binding domain-like 10 146 IPR008979 -
Sto10g0373 882 PANTHER GLYCOSYL HYDROLASE 1 509 IPR044846 GO:0004553|GO:0005975
Sto10g0373 882 PANTHER GLYCOSYL HYDROLASE 509 766 IPR044846 GO:0004553|GO:0005975
Sto10g0373 882 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 1 509 - -
Sto10g0373 882 PANTHER GLYCOSYL HYDROLASE 767 880 IPR044846 GO:0004553|GO:0005975
Sto10g0373 882 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 767 880 - -
Sto10g0373 882 SUPERFAMILY Galactose-binding domain-like 520 656 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0373 Sto-Chr10 2988598 2999595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0373 765 870 Glycoside Hydrolase AT4G33840 43.636 8.05e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0373 - - gmx:100802367 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0373 10 2988598 2999595 Sto10g0373 10 2988598 2999595 ECH